DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:67..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2D6_PANTR (Cytochrome P450 2D6 OS=Pan troglodytes GN=CYP2D6 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFE---LIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF +P G  +  N  ++ +D ++W+ P+ F PE F    LD +G   +    +PF AGRR C G PLA   L+L   SL+  F + +  G
Sbjct:  381 DIEVQGFRIPKGTTLFTNLSSVLKDKAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2D6_PANPA (Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFE---LIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF +P G  +  N  ++ +D ++W+ P+ F PE F    LD +G   +    +PF AGRR C G PLA   L+L   SL+  F + +  G
Sbjct:  381 DIEVQGFRIPKGTTLFTNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  D  LW +P SF P+RFL  D     +    +++ FG G+R C G  +A   +YL L  +I    +    G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPG---EKLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  D  LW +P SF P+RFL  D     +    +++ FG G+R C G  +A   +YL L  +I    +    G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPG---EKLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_LIMLI (Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  D  +W +P SF P+RFL  D     +    +++ FG G+R C G  +A   +YL L  LI    +    G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINHDPEMWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAILIQKLHFLPIPG---EKLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C5081_DICDI (Probable cytochrome P450 508A1 OS=Dictyostelium discoideum GN=cyp508a1-1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = -1
Query:  165 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 491
            D  + G  +P  AQ+L+N  A+G +   ++NP  F P RFL ++      N   +PF  G R C G   A   LY+ + +++ +F  K  DG   + ID  E++GLTL+
Sbjct:  370 DCMIGGHFIPKNAQILINYQALGMNEEYYENPEQFDPSRFLKVE-----SNVAFLPFSIGIRSCVGQSFAQDELYICISNILLNFKLKSIDG---KKIDETEEYGLTLK 470          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKG---RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF++P G  +++N  ++ +D ++W+ P  F PE F    LD +G   ++   +PF AGRR C G PLA   L+L    L+  F + +  G
Sbjct:  384 DIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHF----LDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAG 474          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A3_ONCMY (Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1a3 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 37/115 (32.17%), Postives = 60/115 (52.17%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W +  D  LW  P SF P+RFL   G +L+ K    +++ FG G+R C G  +    +YL L  L+    ++ + G     +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQVNHDPELWKEPSSFNPDRFLSADGTELN-KLEGEKVLVFGMGKRRCIGEAIGRNEVYLFLAILLQRLRFQEKPG---HPLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_CHACA (Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I RD  LW +P SF P+RFL   G +++ K    +++ FG G+R C G  +A   +Y  L  LI    +    G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINRDPELWKDPSSFNPDRFLSCNGTEVN-KQEGEKVMVFGMGKRRCIGEVIARNEVYRGLAILIQRLQFHEMPG---ELLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C513F_DICDI (Probable cytochrome P450 513F1 OS=Dictyostelium discoideum GN=cyp513f1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = -1
Query:  159 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKA 491
            D E+ GF +  G Q++ N ++  R    WD P SF+PERF+  + ++K +N  ++ FG G R C G   A  M++L +  LI ++  K  +    Q +    ++GL +  A
Sbjct:  387 DVEIKGFKIAKGTQIIQNIYSSSRSEQYWDKPLSFIPERFID-NANIKEKNKNIVSFGLGLRGCIGKSFAEYMIFLTVVRLIKNY--KFSNPSPNQPLKEIGEYGLVMNCA 494          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CP2D6_PANTR6.864e-1136.84Cytochrome P450 2D6 OS=Pan troglodytes GN=CYP2D6 P... [more]
CP2D6_PANPA6.864e-1136.84Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3... [more]
CP1A1_PLEPL6.864e-1132.46Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE6.864e-1132.46Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
CP1A1_LIMLI6.864e-1132.46Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 P... [more]
C5081_DICDI6.864e-1133.94Probable cytochrome P450 508A1 OS=Dictyostelium di... [more]
CP2DI_RAT8.965e-1135.79Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP1A3_ONCMY8.965e-1132.17Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP1A1_CHACA8.965e-1133.91Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cy... [more]
C513F_DICDI8.965e-1131.53Probable cytochrome P450 513F1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
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