DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:67..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 7.554e-26
Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  138 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 491
            DT + G+ VP   +V VN WAIGRD + W  P  F P+RF+G D+D  G +FELIPFGAGRRICPGL +    +   L +L+  +DW L   + P+ + MEE   LT  +  PL  +P
Sbjct:  405 DTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVP 522          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 9.866e-26
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = -1
Query:  171 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLT 491
            +TE+ G+ +P   +V+VN WA+GRD   WD+  SF PERF    +D  G NFE +PFG GRRICPG+   +  +YL L  L+  FDWKL  G+ P+ +D+ E  G+T
Sbjct:  378 ETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGIT 484          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.289e-25
Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = -1
Query:  138 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 494
            ++ ++ G+ +P   ++ VN WAIGRD   W +P  F+PERF+  ++D KG++FEL+PFG GRRICP + +   M+   L +L+  FDWKL +GV  + ID+EE  GLT+ K   L  +P
Sbjct:  375 SEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.289e-25
Identity = 51/120 (42.50%), Postives = 79/120 (65.83%), Query Frame = -1
Query:  135 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 494
            ++ ++ G+ +    ++ VN WAIGRD  +W +P  F+PERF+  D+DVKG+++EL+PFG+GRRICP + + I  +   L +L+  FDWKL +GV  + I M+E  GLT  K   L  +P+
Sbjct:  379 SEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLVPV 498          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.289e-25
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = -1
Query:  135 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 494
            AD ++ G+ +P    +LVN W+IGRD   W NP  F PERF+   +D KG +FEL+PFG+GRRICPG+ +AI  + L L +L+  FDW + +    + +DMEE   LT+ K  PL  LP+
Sbjct:  382 ADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPE--KKKDMDMEEAGDLTVDKKVPLELLPV 499          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25
Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = -1
Query:  138 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 494
            A  ++ G+ +P   Q++VN +AIGRD  LW+NP  F PERF+   +D +G NFEL+PFG+GRRICPG+ + I  + L L +L+  FDW L +G T + ID+EE+  + + K   L  +P
Sbjct:  379 AKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVP 497          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.198e-25
Identity = 52/119 (43.70%), Postives = 79/119 (66.39%), Query Frame = -1
Query:  135 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG---LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 482
            V G+ +P   ++ VN WAIGRD + W+NP+ F PERF       LDV+G+++  IPFG+GRR CPG  LA++++++ L  +I  F WK ++G     +DMEEK G+TL +A P+  +P+
Sbjct:  377 VCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNG--NNKVDMEEKSGITLPRAHPIICVPV 493          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.198e-25
Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  135 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 485
            ++ G+ +P+  ++++N WAIGR+   W    SF PERFL   +D +G +FE IPFGAGRRICPG+  AI  + L L  L+  FDWKL + +  + +DM E  G+TL++   L  +PI
Sbjct:  390 QINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPI 506          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.198e-25
Identity = 50/119 (42.02%), Postives = 78/119 (65.55%), Query Frame = -1
Query:  138 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 494
            +D ++ G+ +P    + +NT++IGRD + W+NP  F PERF+   ++ KG+++EL+PFGAGRRICPG+   I ++ L L +++  FDW L DG+  + IDMEE     + K  PL  +P
Sbjct:  377 SDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLELIP 495          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.871e-25
Identity = 49/117 (41.88%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  138 TEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 488
            T + G+ +P   +V++NTWAIGRD   W +   F+PERF    +D KG +FE IPFGAGRR+CPG+   +  + L L  L+  F+W+L + + P+ +DM+E FG+T+ +   L  +P
Sbjct:  382 TNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIP 498          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
C71E1_SORBI7.554e-2645.764-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71D7_SOLCH9.866e-2646.73Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BW_ARATH1.289e-2543.70Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.289e-2542.50Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH1.289e-2545.83Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BN_ARATH1.683e-2544.54Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN2.198e-2543.70Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71DA_SOYBN2.198e-2543.59Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BM_ARATH2.198e-2542.02Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN2.871e-2541.88Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
back to top