DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:67..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.687e-23
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = -1
Query:  138 ADTEVAGFMVPNGAQVLVNTWAIGRDASLW-DNPYSFVPERFLG--LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 494
            AD ++ G+ +P    + VN WA+ RD + W DNP  F+PERF+     +D KG++FEL+PFG+GRR+CP + L I M+ +   +L+  FDW L  G+ P+ I M+   GL + K   L   P
Sbjct:  374 ADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP 495          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.687e-23
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = -1
Query:  171 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLT 491
            +TE+ G+ +P   +V+VN WA+GRD   WD+   F PERF    +D  G NFE +PFG GRRICPG    +   YL L  L+  FDWKL  G+ P+ +D+ E  G++
Sbjct:  379 ETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMS 485          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.509e-23
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = -1
Query:  135 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG---LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 482
            V G+ +P   ++ VN WAIGRD + W+ P+ F PERF+      LDV+G+++  IPFG+GRR CPG  LA +++ + L  +I  F WKL  G     +DMEEK G+TL +A P+  +P+
Sbjct:  384 VCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGG--NGKVDMEEKSGITLPRANPIICVPV 500          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.509e-23
Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = -1
Query:  138 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 485
            E+ G+ +P  ++V+VN WAIGRD  LW     F PERF+   ++ K  +FE IPFGAGRR+CPGL   +  +  +L  L+  FDWKL  G   + + M E FG+T+ +   L  +P
Sbjct:  376 EINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIP 491          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.583e-23
Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = -1
Query:  138 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL----GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKL--EDGVTPQTIDMEEKFGLTLQKARPLRALP 491
            D E+ G+ +P G +V+VN WA+ RD + WD    F PERFL      ++D+ G++   +PFGAGRRIC G   AI  + +ML +LI  FDW++  E   T   +DM ++FG+TL++ + L  +P
Sbjct:  403 DCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVP 526          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.817e-23
Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = -1
Query:  162 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQK 482
            + GF +P   +VLVN  +I  D   W+NP  F+PERFL   +D KG++FE++PFG GRR CPG+  A+ ++ L L +L+  FDW+L  G+  Q +DMEE  G+T+ K
Sbjct:  380 IKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHK 486          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.021e-22
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  132 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDL----DVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPIA 485
            EVAG+ +P   +V+VN WA+GR +  W+    FVPERFL  D+    D+K   F+ + FG+GRR+CPG+  A   +  ML +L+  FDW+L  G+  + +DM E FG+T+ +   L  +P A
Sbjct:  416 EVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 537          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.971e-22
Identity = 50/123 (40.65%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  138 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD-------LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 485
            +V GF V  G +V+VN WA+ R    W +P  F PERF   D       +D +G  FE IPFG+GRR+CPG    +  L LM+  L+  FDW L DG+ P+ +DM+   G T+++   L  +P
Sbjct:  385 DVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.880e-22
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = -1
Query:  141 DTEVAGFMVPNGAQVLVNTWAIGRDASLWD-NPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 491
            D  +  + +P G QV++N WAIGR+A+ W  +   F PER L   +D +G NFELIPFGAGRRICP +  A+ ++ + L +L++ +DW+L +       ++ E  G+ + +  PL A+
Sbjct:  368 DVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAI 485          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.618e-22
Identity = 54/129 (41.86%), Postives = 80/129 (62.02%), Query Frame = -1
Query:  132 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL--GLDL--DVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKL----EDGVTPQTIDMEEKFGLTLQKARPLRALPIA 494
            AD ++ G+ +P   +VLVN WAIGRD ++W+ P  F+PERF+  G D      G++F  +PFG+GRRICPG    +  + +ML +L+  FDW++    EDG     + M+EKFGL L++   L  +P A
Sbjct:  407 ADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGC--WKVSMDEKFGLMLRRNELLYLVPRA 533          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
C83B1_ARATH2.687e-2340.98Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH2.687e-2344.86Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C93A1_SOYBN3.509e-2343.70Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71D9_SOYBN3.509e-2342.24Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71C1_MAIZE4.583e-2341.13Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71A9_SOYBN7.817e-2345.79Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71C4_MAIZE1.021e-2240.98Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C99A1_SORBI2.971e-2240.65Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71AM_ARATH3.880e-2238.98Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE6.618e-2241.86Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
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