DN617832

Overview
NameDN617832
Unique NameDN617832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:1229..1681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = 2
Query:   74 KSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLRRKK 451
            K   ++LPP P   P+IG+L  +   PH+   KL+  HGPIM L  G V  VV S+A  AKE L+  + +F NR   +       + FG    P     + ++K+C S     R LD +  +R+++
Sbjct:   23 KERKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQFLTYVFG----PYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQE 144          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 37/121 (30.58%), Postives = 66/121 (54.55%), Query Frame = 2
Query:   89 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLRRKK 451
            +LPP P   PVIGNL +LG  PH+ L  L+  +GP+M L FG+V  +V S   +  +I++  D  F NR    AI         + + P    W++++ +   H  +++ + ++++LR ++
Sbjct:   32 KLPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEE 152          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.294e-12
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 2
Query:   35 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQ-DTSFCNRTIP-DAIY-AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLRR 445
            +L + ++Y     K+    LPPGP   P +G+L  +    H+ L + +  +GPI SL+FG    VV +S ++A+E    Q D    +R +   A Y A+ H   G    P    WRNLR+IC+    SS +L  +QH+R+
Sbjct:    9 LLFLVISYKFLYSKTQRFNLPPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGT--APYGDHWRNLRRICSQEILSSHRLINFQHIRK 146          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 40/120 (33.33%), Postives = 64/120 (53.33%), Query Frame = 2
Query:   92 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLR 442
            LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A +IL+  D    NR    + D I   G     + + P    W+ ++ IC  +  S++ + +Y+ +R
Sbjct:   33 LPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGR---DVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIR 149          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.208e-12
Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 2
Query:   89 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQH 436
            +LPPGP P PV GN L++GD   H++L  LAK  G I+ L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +  Y++
Sbjct:   32 KLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRY 148          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 2
Query:   20 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQ 433
            LL  +  ++A  + S+  +    +LPPGP P P+ GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +  Y+
Sbjct:   10 LLALFAAIIASIFISK-LRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYR 147          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/118 (28.81%), Postives = 64/118 (54.24%), Query Frame = 2
Query:   89 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLR 442
            + PPGP+P P++GNL ++     +   + A+ +GPI+S+  G +  VV SSA +AKE+L+  D    +R    +  A   +   + W      +  +RK+C    F+ ++L++ + +R
Sbjct:   26 KFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIR 143          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12
Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 2
Query:   20 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQH 436
            LL S++ V+     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +  Y++
Sbjct:   10 LLGSFVAVLVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRY 148          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2
Query:   89 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQ 433
            +LPPGP P P+ GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +  Y+
Sbjct:   32 KLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYR 147          
BLAST of DN617832 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12
Identity = 41/138 (29.71%), Postives = 68/138 (49.28%), Query Frame = 2
Query:   35 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAYQHLR 442
            I  V+L       K     LPP P   PVIGNL ++G+ PH+S  +LA+  G +M L  G V   V SS   A+E+L+  D   C+R   +   + + G  +  + + P    W+  R+      F S++L ++ +++
Sbjct:   11 ITFVSLTIVGCKIKRSIWNLPPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKD--LNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIK 146          
The following BLAST results are available for this feature:
BLAST of DN617832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C93A2_SOYBN9.909e-1333.33Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AR_ARATH9.909e-1330.58Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C81F1_ARATH1.294e-1233.57Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71AJ_ARATH1.690e-1233.33Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM2.208e-1235.83Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_ZINEL2.883e-1233.10Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C98A3_ARATH2.883e-1228.81Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPKI3.766e-1233.57Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_GLYEC3.766e-1236.13Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71BH_ARATH3.766e-1229.71Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617832 ID=DN617832; Name=DN617832; organism=Citrus sinensis; type=EST; length=453bp
GTAAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTCGCTT
TAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCCACCG
GGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCGACAA
ACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATAATGA
GTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGCCATG
GCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAAT
CCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGC
TGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACAT
GCTTTCTCTAGTCGCCAACTCGATGCCTATCAGCACCTTCGGCGTAAGAA
AAT
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