DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSPR+PS EE+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  690 EKFDYPNEIGPGVYDIHSPRVPSREEMVKLLRKAALRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELR 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -3
Query:  273 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 482
            Y   IGPGVYDIHSPR+P+  EI   + K  A ++   LWVNPDCGLKTR++ E + AL+NMV AA+ +R
Sbjct:  683 YPNDIGPGVYDIHSPRVPAGAEIRALLEKAAAAVDPERLWVNPDCGLKTRQWPEAEQALANMVEAARAMR 752          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = -3
Query:  273 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 482
            Y   IGPGVYDIHSP IP    + D + K    +    LWVNPDCGLKTR + EV PAL NMVAAA+ LR
Sbjct:  691 YPNQIGPGVYDIHSPNIPDQAHVVDLMKKAAERIPAERLWVNPDCGLKTRAWEEVIPALKNMVAAARTLR 760          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IGPGVYDIHSP IPS ++I   + K   V+    LWVNPDCGLKTR + E + ALSNMV AA  LR +
Sbjct:  686 QYPNDIGPGVYDIHSPNIPSEDDIIQLLRKAAQVIPIKRLWVNPDCGLKTRTWLETRKALSNMVNAAHKLRRE 758          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 43/74 (58.11%), Postives = 50/74 (67.57%), Query Frame = -3
Query:  261 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 482
            Y  G+G GVYDIHSPR+P+TEEI   I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AAK  R + A
Sbjct:  686 YVKGLGLGVYDIHSPRVPATEEIYQIIDDALEVCPTDRFWVNPDCGLKTRQQEETVAALKNMVDAAKQARKKQA 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_ACICJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = -3
Query:  255 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 482
            Y A IGPGV+DIHSPRIP  EEI   +      L  + LWVNPDCGLKTR + EV PAL N+V AA+ LR +   A
Sbjct:  694 YPAEIGPGVWDIHSPRIPPEEEILALLRLARRKLADDQLWVNPDCGLKTRNWREVIPALENLVGAARRLRAEAIPA 769          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E   Y   IGPGVYDIHSP IP+   I D + K    +    LWVNPDCGLKTR + EV+ AL+NMV AAK LR +
Sbjct:  683 EEFNYPNEIGPGVYDIHSPNIPAQAWIEDLLRKAAEKIPAQRLWVNPDCGLKTRNWPEVEAALTNMVNAAKALRAE 758          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_SHEON (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shewanella oneidensis GN=metE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            E  +Y   IGPGVYDIHSP  PS E +   I K    +    LWVNPDCGLKTR + EV+PAL NMV A + LR +L
Sbjct:  683 EDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQLWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRL 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = -3
Query:  273 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 482
            Y   IGPGVYDIHSPR+P T E+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  694 YPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNMVAAARQLR 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_HAES2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 2336) GN=metE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  261 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 485
            KY   IGPGVYDIHSPR+P+ EEI   + K L V+    LWVNPDCGLKTR ++E    L  M++  K LR +LA
Sbjct:  683 KYPNDIGPGVYDIHSPRVPTAEEIEHLLRKALNVVPKERLWVNPDCGLKTRGWSETIAQLEVMMSVTKKLRAELA 757          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_PSEPW2.436e-1656.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA2.436e-1655.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP82.436e-1658.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH2.436e-1656.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACA22.436e-1658.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACICJ2.436e-1656.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH3.181e-1655.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHEON3.181e-1654.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU53.181e-1657.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES23.181e-1654.675-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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