DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.426e-16
Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = -3
Query:  261 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 485
            KY   IGPGVYDIHSPR+P+  E+   + K L V+    LWVNPDCGLKTR +TE    L  MV   K LR +LA
Sbjct:  682 KYPNDIGPGVYDIHSPRVPTAAEVEHLLRKALNVIPKERLWVNPDCGLKTRGWTETIDQLKVMVDVTKKLRAELA 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = -3
Query:  267 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 482
            Y A +GPGVYD+HSP IP+TE + + + K +  L    +WVNPDCGLKTR++ E  PA  NMV AA  LR +
Sbjct:  673 YPAQVGPGVYDVHSPSIPTTEYLRESLYKCIQYLPVTQIWVNPDCGLKTRRWEEAIPATRNMVQAAISLRQE 744          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = -3
Query:  255 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 482
            Y   IGPGVYDIHSPR+P  EE+   ++K   V+    LWVNPDCGLKTR + EV+ AL  MV A + LR + A A
Sbjct:  683 YPNEIGPGVYDIHSPRVPRVEEMEALLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALRGMVEATRRLRARHAGA 758          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 41/74 (55.41%), Postives = 48/74 (64.86%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR +TE + +L+NMV AAK LR
Sbjct:  681 ENFSYPNEIGPGVYDIHSPNVPSVEWIEALLRKAADRIPVERLWVNPDCGLKTRGWTETRQSLANMVQAAKRLR 754          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y   IGPGVYDIHSPR+P   E+ + + K    ++  +LWVNPDCGLKTR + E + AL  MV  AK LR+ L
Sbjct:  684 YPNEIGPGVYDIHSPRVPDASEMFELLKKASRYIDPTLLWVNPDCGLKTRNWPETQTALQKMVDCAKTLRSAL 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = -3
Query:  270 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT 485
            +Y   IGPGVYDIHSP IP  E I + +      +    LW+NPDCGLKTRK+ EV PAL  MVAAA+ LR+
Sbjct:  685 EYPNDIGPGVYDIHSPNIPDKEHIINLMTLAAERIPAERLWINPDCGLKTRKWEEVTPALETMVAAARELRS 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = -3
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IG G++DIHSPRIPS +E   RI ++L V   +  WVNPDCGLKTR + EVK +L+NMV AAK  R +
Sbjct:  694 EYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEFRAK 766          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  264 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 485
            KY   IGPGVYDIHSP IPS E I   + + +  +    LWVNPDCGLKTR + E   +L NMV AAK+LR +L
Sbjct:  683 KYPNDIGPGVYDIHSPNIPSIEWIMTLLRQAMHYIPVKRLWVNPDCGLKTRTWDETYYSLENMVRAAKILRKKL 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y  GIG GVYDIHSPR+PS +E+   + + L V +    W+NPDCGLKTR+  EV PAL +MV AAK  R+ L
Sbjct:  686 YEKGIGLGVYDIHSPRVPSKDEMFTIVEQSLQVCDPKYFWINPDCGLKTRRTEEVIPALEHMVQAAKDARSLL 758          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACHK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y  GIG GVYDIHSPR+PS +E+   + + L V +    W+NPDCGLKTR+  EV PAL +MV AAK  R+ L
Sbjct:  686 YEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLQVCDPKYFWINPDCGLKTRRTEEVIPALEHMVQAAKDARSLL 758          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_HAEIE5.426e-1654.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_TRIEI7.087e-1652.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO7.087e-1653.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL7.087e-1655.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU7.087e-1652.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV7.087e-1655.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL7.087e-1654.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCBP7.087e-1655.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK7.087e-1654.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHK7.087e-1654.795-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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