DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_THEP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  267 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 470
            IG GV+DIHSP +PS +E+   I ++L +L   ++WVNPDCGLKTR + EV P+L NMV  AK LR +
Sbjct:  664 IGVGVWDIHSPAVPSVDEMKSIIERVLRILPKELIWVNPDCGLKTRNWEEVVPSLKNMVDLAKKLRKE 731          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_SYNJB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Synechococcus sp. GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y   +G GVYD+HSP +PS E+I  ++   LA L     WVNPDCGLKTR++ EV PAL NMVAAA  L  +L
Sbjct:  672 YRHQVGNGVYDVHSPAVPSVEQILQQLRTGLAHLPVEQTWVNPDCGLKTRRWEEVIPALKNMVAAAHQLGEEL 744          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSP +P+ E I   + K  + +    LWVNPDCGLKTR ++E + AL+NMV AAK LR
Sbjct:  681 EHFDYPNEIGPGVYDIHSPNVPNVEWIVGLLRKAQSRIPAERLWVNPDCGLKTRGWSETRAALANMVEAAKYLR 754          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E   Y   IGPGVYDIHSP IPS E+I   + K   ++    LW+NPDCGLKTR + E + AL +MV A K LR Q
Sbjct:  685 EEFDYPNEIGPGVYDIHSPNIPSIEQIVHLVEKAETLIPIERLWINPDCGLKTRNWEETEAALRSMVEATKKLREQ 760          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E  +Y   IGPGVYDIHSP +PS E I   +NK    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  678 EEFEYPNEIGPGVYDIHSPNVPSVEWIEALLNKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_THEEB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = -3
Query:  252 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 482
            Y   +G GVYD+HSP +PS E++  ++   +A L    +WVNPDCGLKTR + EV P+L NMV A K +R ++  +K
Sbjct:  679 YRHQVGVGVYDVHSPAVPSVEQLVQQLRTSVANLAPEQIWVNPDCGLKTRHWEEVIPSLKNMVEATKTIRQEVMQSK 755          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  684 EEVTYDKEIGLGVYDIHSPRVPTVSEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_LACLA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. lactis GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = -3
Query:  267 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 470
            +GPGVYDIHSPRIPS +EI +++ K+L  L    +WVNPDCGLKTR   E  P+L ++V A ++LR +
Sbjct:  686 VGPGVYDIHSPRIPSVKEIQNQLEKILDKLPIEQVWVNPDCGLKTRGNAETIPSLRHLVEATRVLRKE 753          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  273 GVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 491
            G  Y A IGPGVYDIHSPR+P+ EE+   +      L    LWVNPDCGLKTRK+ E + A+ NMV AA+  R
Sbjct:  703 GYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMVEAARRAR 775          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = -3
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            KY   IGPGVYDIHSP IPS + I   + K L  +    LWVNPDCGLKTR +TE   AL NM+ A   +R +
Sbjct:  684 KYPNAIGPGVYDIHSPNIPSVQSIEKLLKKALKYISIQQLWVNPDCGLKTRNWTETSLALQNMLQATLNIRKE 756          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_THEP11.209e-1554.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SYNJB1.209e-1554.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH1.209e-1554.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR1.209e-1552.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CITK81.209e-1555.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEEB1.579e-1546.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISIN1.579e-1550.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLA1.579e-1554.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR1.579e-1554.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC1.579e-1553.425-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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