DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  681 EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR +
Sbjct:  681 EDFAYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVLAAQRLREE 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = -3
Query:  264 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 470
            +GPGVYDIHSPR+P+ +EIA  I  +LA +    +W+NPDCGLKTR  +E K +L ++  AAK  R +L
Sbjct:  681 VGPGVYDIHSPRVPAVDEIAHTIQAILAKVPKEKVWINPDCGLKTRGESETKASLIHLTQAAKAARKEL 749          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PASMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pasteurella multocida GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 40/74 (54.05%), Postives = 46/74 (62.16%), Query Frame = -3
Query:  264 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 485
            KY   IGPGVYDIHSPR+P  EEI   + K L V+    LWVNPDCGLKTR + E    L  M+   K LR +L
Sbjct:  683 KYPNDIGPGVYDIHSPRVPKAEEIERLLRKALNVVPKERLWVNPDCGLKTRGWPETIAQLEVMMEVTKKLRAEL 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  261 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 482
            Y  G+G GVYDIHSPR+PS++E+   I   L V   +  WVNPDCGLKTR+  E   AL NMV AAK  R +LA
Sbjct:  686 YLKGLGLGVYDIHSPRVPSSDEMLTIIEDALKVCPADRFWVNPDCGLKTRQPEETIAALKNMVEAAKQARGKLA 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTR+  E   AL +M+ A K +R +
Sbjct:  684 EEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRQEPETIAALQDMIKATKEVRAE 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_LACLS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = -3
Query:  267 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 470
            +GPGVYDIHSPRIPS++EI  ++ K+L  L    +WVNPDCGLKTR   E  P+L+++V A K +R +
Sbjct:  684 VGPGVYDIHSPRIPSSQEIKIQLEKILNKLPIEQVWVNPDCGLKTRGNKETIPSLTHLVEATKEVRKE 751          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E  +Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  678 EAFEYPNEIGPGVYDIHSPNVPSVEWIEALLAKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BUCAI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -3
Query:  252 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 485
            KY   +GPG YDIHS  IPS + I   +NK +  +    +WVNPDCGLKTR + E   +L NMV A K+LR ++  ++
Sbjct:  679 KYPNEVGPGAYDIHSSNIPSVQSIISLLNKAMKYIPLKRIWVNPDCGLKTRNWNETILSLKNMVEATKILREKMKDSE 756          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = -3
Query:  273 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 470
            +GPGVYDIHSPRIPS++EI  ++ K+L  L    +WVNPDCGLKTR   E  P+L+++V A K +R
Sbjct:  684 VGPGVYDIHSPRIPSSQEIKIQLEKILNKLPIEQVWVNPDCGLKTRGNKETIPSLTHLVEATKEVR 749          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_YERP34.594e-1552.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE84.594e-1552.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY4.594e-1552.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PASMU4.594e-1554.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACLD4.594e-1555.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW65.999e-1548.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLS5.999e-1554.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP35.999e-1554.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAI5.999e-1546.155-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM7.835e-1556.065-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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