DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:591..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.439e-18
Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = -3 
Query:  258 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MW2) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain N315) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metE PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Newman) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain COL) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STAEQ4.439e-1855.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAW5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAT5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAS5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAR5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAN5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAM5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAE5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAC5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAB5.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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