DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = -3
Query:  264 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 470
            +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  681 VGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = -3
Query:  261 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 485
            +Y   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+   + LR +LA
Sbjct:  683 QYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVTRKLRAELA 757          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = -3
Query:  273 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 482
            Y   +GPGVYDIHSPR+PS +E+   +     VL  + LW NPDCGLKTR + E + +L+++VAAA  +R
Sbjct:  708 YPNEVGPGVYDIHSPRVPSIDEMETLLRAASRVLPLDRLWANPDCGLKTRDWPETRASLAHLVAAATRVR 777          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E  +Y   IGPGVYDIHSP +P  + +   + K    L +  LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  689 EDFRYPNDIGPGVYDIHSPNVPDVDWMVGLMRKAAGRLPSERLWVNPDCGLKTRAWPETEAALVGMVEAARALR 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = -3
Query:  225 YGAGIGPGVYDIHSPRIPSTEEIADRINKML--AVLETNI--LWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT--QLASAK*VVLEIGGI 482
            YG  IGPGVYD+HSP +PS E I  RI   +   +L      +WVNPDCGLKTR + E   AL+NMV AA   R   QLA    V    GG+
Sbjct:  696 YGRDIGPGVYDVHSPVVPSVEFIKSRIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALANMVEAAAQARAELQLAGGAAVAPVTGGV 787          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+ LR
Sbjct:  689 EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAARTLR 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E  +Y   IGPGVYDIHSP +P    I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  678 EEFEYPNEIGPGVYDIHSPNVPDVAWIEALLKKAAQRIPQERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = -3
Query:  258 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 482
            Y   IGPGVYDIHSPR+P+  E+   +      L +  +WVNPDCGLKTR + E + AL  MV AA+ LR  + +
Sbjct:  689 YPNDIGPGVYDIHSPRVPARGEMLSLLRLAAERLPSERIWVNPDCGLKTRGWPETEAALVEMVEAARELRNAIGA 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = -3
Query:  267 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 482
            Y   IG G++DIHSPRIPS +E   +I+ +L        WVNPDCGLKTR + E + +L++MV AAK  R Q
Sbjct:  693 YPNHIGLGLFDIHSPRIPSKDEFIAKISTILKSYPAEKFWVNPDCGLKTRGWEETRLSLTHMVEAAKYFREQ 764          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STRGC5.079e-1452.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB5.079e-1448.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM5.079e-1450.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD5.079e-1450.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE6.633e-1448.915-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA18.663e-1451.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS81.131e-1351.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL12.521e-1348.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST4.299e-1350.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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