DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:591..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAA9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH9) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH1) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3 
Query:  267 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 494
            E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = -3 
Query:  264 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 488
            V +  G+GPGVYDIHSPR+P  EEIA  + + L  +    LWVNPDCGLKTR   EV+ +L N+V AAKL+R +L
Sbjct:  679 VGFDLGVGPGVYDIHSPRVPGVEEIAASLREALKAVPVERLWVNPDCGLKTRGPAEVEASLRNLVDAAKLVRAEL 753
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = -3 
Query:  273 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 488
            + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  686 IGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = -3 
Query:  273 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 488
            + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  686 IGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = -3 
Query:  273 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 488
            + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  686 IGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = -3 
Query:  273 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 488
            + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  686 IGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STAA95.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA85.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA35.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA25.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA15.797e-1856.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR5.797e-1856.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU5.797e-1856.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA5.797e-1856.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP5.797e-1856.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO5.797e-1856.945-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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