DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_HAHCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = -3
Query:  255 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 494
            +  KY   IGPGVYDIHSP IPS   I   + K    +  + LWVNPDCGLKTR + EV+PAL NMV AAK LR  + +A
Sbjct:  682 DNFKYPNEIGPGVYDIHSPNIPSETHIVQLMRKAAERIPAHRLWVNPDCGLKTRNWEEVRPALQNMVNAAKQLRADVVAA 761          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = -3
Query:  255 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 485
            +Y   IGPGVYDIHSPR+PS  EI   ++K L V+    LWVNPDCGLKTR + EV+ AL+ MVA  + LR +LA A
Sbjct:  683 RYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGRELREKLAQA 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            +  +Y   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  687 DSFRYPNEIGPGVYDIHSPNIPTQDHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = -3
Query:  264 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 485
            KY   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  690 KYPNEIGPGVYDIHSPNIPTQDHIVGLMRKAAERIPAERLWVNPDCGLKTRQWGEVIPALTNMVAAAKTLRNQV 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            +  +Y   IGPGVYDIHSP IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  687 DSFRYPNEIGPGVYDIHSPNIPTQDHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.797e-18
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = -3
Query:  255 IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 470
            IGPG+YDIHSP  P+  ++  RIN++L  +    LW+NPDCGLKTR + E+K +L+NMV+AAKLLR Q  S+
Sbjct:  693 IGPGIYDIHSPNKPTQNDLIRRINQLLKYIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS 764          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = -3
Query:  255 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 485
            KY   IGPGVYDIHSPR+P   EI++ I      L    LWVNPDCGLKTR++ EV+PAL NMVAAA+ +R +  +A
Sbjct:  700 KYPNEIGPGVYDIHSPRVPEVGEISNLIMLARKRLSDGQLWVNPDCGLKTRRWEEVRPALVNMVAAARAIRQKAQTA 776          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = -3
Query:  264 GPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 467
            GPGVYDIHSPRIPS EE  +RI + LA ++ N +W+NPDCGLKTR   E  P+L++MV AAK +R  L
Sbjct:  699 GPGVYDIHSPRIPSVEETEERIGESLAKMDVNKVWINPDCGLKTRGNDETWPSLTHMVQAAKAMRANL 766          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18
Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            E   Y  GIG GVYDIHSPR+PS EE+ + I + L VL  ++ WVNPDCGLKTR   E   AL NMVAAA+  R +L
Sbjct:  676 EKTTYEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNMVAAARAAREEL 752          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.889e-18
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = -3
Query:  273 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 485
            KY   IGPGVYDIHSPR+P+ +E+   +      L    +W+NPDCGLKTRK+ EV+PAL NMV AAKL+R
Sbjct:  701 KYPNEIGPGVYDIHSPRVPAVDEMTGLLKLARERLSDRQIWINPDCGLKTRKWEEVRPALVNMVEAAKLMR 771          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_HAHCH5.797e-1855.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO5.797e-1857.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM5.797e-1855.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ5.797e-1859.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA45.797e-1855.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB5.797e-1855.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHILO7.572e-1857.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA07.572e-1860.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD7.572e-1857.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITWN9.889e-1857.755-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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