DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:591..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_VIBVY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSP IPS E I D + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LR + A
Sbjct:  683 EEFNYPNEIGPGVYDIHSPNIPSEEWIVDLVKKAAQKIPVERLWVNPDCGLKTRNWPETEAALANLVSAAKRLRKEFA 760          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSP IPS E I D + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LR + A
Sbjct:  683 EEFNYPNEIGPGVYDIHSPNIPSEEWIVDLVKKAAQKIPVERLWVNPDCGLKTRNWPETEAALANLVSAAKRLRKEFA 760          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            E   Y   IGPGVYDIHSP IPS E I + I K    +    LWVNPDCGLKTR ++E + AL+N+V+AAK LR +L
Sbjct:  683 EDFNYPNEIGPGVYDIHSPNIPSEEWIEELIKKAAEKIPAQRLWVNPDCGLKTRNWSETEAALANLVSAAKKLRAEL 759          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  687 EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  687 EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  687 EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.877e-17
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = -3
Query:  261 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 485
            +Y   IGPGVYDIHSP IP+ E++  R+ ++L  L    LW+NPDCGLKTR Y EV  AL  MV A K +R Q++
Sbjct:  674 RYTQQIGPGVYDIHSPNIPTVEQLVARMRQLLNYLPAEQLWINPDCGLKTRTYAEVAAALQAMVTATKQVRNQIS 748          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_DESVH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.758e-17
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y   +GPGVYDIHSPR+PS +E+   + +  AVL  + LWVNPDCGLKTR++ E + AL+NMV AA+ +R +L
Sbjct:  711 YPNEVGPGVYDIHSPRVPSVDEMEALLLRAAAVLPVDRLWVNPDCGLKTREWPETRAALANMVEAARRVRARL 783          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.758e-17
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = -3
Query:  264 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 494
            + V +   +GPGVYDIHSPR+PS EE++  I K+L  L    +W+NPDCGLKTR Y EV  +L N+V A + +R QL
Sbjct:  678 KAVHFKTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASLKNLVTATQKIRKQL 754          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.908e-17
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = -3
Query:  261 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 494
            E   Y   IGPGVYDIHSP IP+ E I   + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LRT+LA
Sbjct:  683 EAFNYPNEIGPGVYDIHSPNIPTQEWIEALLKKAAEKVPVQRLWVNPDCGLKTRNWDETEAALANLVSAAKKLRTELA 760          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_VIBVY2.877e-1755.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU2.877e-1755.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA2.877e-1755.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE2.877e-1757.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAB2.877e-1757.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA82.877e-1757.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HERA22.877e-1753.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVH3.758e-1754.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD3.758e-1751.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB4.908e-1755.135-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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