DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:591..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.371e-17
Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = -3
Query:  273 VKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 488
            V +   +GPGVYDIHSPR+PST EIA+ +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA  +R
Sbjct:  682 VGFSNSVGPGVYDIHSPRVPSTAEIAESLRAALRAVPAERLWVNPDCGLKTRNPDEVSASLKNMVAAAHEVR 753          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = -3
Query:  264 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 482
            Y    GPGVYDIHSPRIP  EE A  + K L  +    LWVNPDCGLKTR + E + +L N+VAAA+ +R +L
Sbjct:  697 YPREAGPGVYDIHSPRIPGAEEAAALLRKGLEAIPAERLWVNPDCGLKTRGWPETRASLENLVAAARQIRAEL 769          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E + Y  GIG GVYDIHSPRIP+ +EIA  I++ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V   +  R
Sbjct:  667 EDINYDLGIGLGVYDIHSPRIPTEDEIATAIDRSLQQIDRSLFWVNPDCGLKTRKEDEVKDALTVLVNTVRKKR 740          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSPR+P+ E++   ++K    +    LWVNPDCGLKTR + E + AL+NMVAAA+ LR
Sbjct:  685 EAFAYPNEIGPGVYDIHSPRVPAVEDMVKLLSKAAERIPAARLWVNPDCGLKTRAWAETEAALANMVAAARQLR 758          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSPR+PS  E+ + + K   V+    LWVNPDCGLKTR + E   +L NMVAAA+ LR
Sbjct:  680 ESFTYPNDIGPGVYDIHSPRVPSVAEMVELLRKASEVIPLERLWVNPDCGLKTRAWPETLASLRNMVAAAQKLR 753          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  252 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 494
            E   Y   IGPG+YDIHSPRIP   EI +   + L  +    LW+NPDCGLKTR + E K ALS MV AAK LR   +S K
Sbjct:  682 EKFAYPNDIGPGIYDIHSPRIPRVAEIEELAVRALQYIPIERLWINPDCGLKTRNWEETKEALSRMVDAAKHLRKAFSSEK 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  252 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 494
            E   Y   IGPG+YDIHSPRIP   EI +   + L  +    LW+NPDCGLKTR + E K ALS MV AAK LR   +S K
Sbjct:  682 EKFAYPNDIGPGIYDIHSPRIPRVAEIEELAVRALQYIPIERLWINPDCGLKTRNWEETKEALSRMVDAAKHLRKAFSSEK 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  252 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 494
            E   Y   IGPG+YDIHSPRIP   EI +   + L  +    LW+NPDCGLKTR + E K ALS MV AAK LR   +S K
Sbjct:  682 EKFAYPNDIGPGIYDIHSPRIPRVAEIEELAVRALQYIPIERLWINPDCGLKTRNWEETKEALSRMVDAAKHLRKAFSSEK 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  252 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 494
            E   Y   IGPG+YDIHSPRIP   EI +   + L  +    LW+NPDCGLKTR + E K ALS MV AAK LR   +S K
Sbjct:  682 EKFAYPNDIGPGIYDIHSPRIPRVAEIEELAVRALQYIPIERLWINPDCGLKTRNWEETKEALSRMVDAAKHLRKAFSSEK 762          
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  252 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 494
            E   Y   IGPG+YDIHSPRIP   EI +   + L  +    LW+NPDCGLKTR + E K ALS MV AAK LR   +S K
Sbjct:  682 EKFAYPNDIGPGIYDIHSPRIPRVAEIEELAVRALQYIPIERLWINPDCGLKTRNWEETKEALSRMVDAAKHLRKAFSSEK 762          
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_MYCA18.371e-1756.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG1.865e-1654.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAHJ1.865e-1654.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA71.865e-1654.055-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD1.865e-1655.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU1.865e-1653.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR1.865e-1653.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN1.865e-1653.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB21.865e-1653.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB11.865e-1653.095-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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