DN617830

Overview
NameDN617830
Unique NameDN617830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:591..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = -3 
Query:  258 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 482
            Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  682 YPNEIGPGVYDIHSPRVPGADAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALANMVRAAKALRAKLAA 756
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = -3 
Query:  258 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 482
            Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  682 YPNEIGPGVYDIHSPRVPDAQAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALTNMVRAAKALRAKLAA 756
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = -3 
Query:  261 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 482
            Y  G+G GVYDIHSPR+PS EE++  I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AA++ R +LA
Sbjct:  686 YLKGLGLGVYDIHSPRVPSVEEMSQIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTAAEVARKKLA 759
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = -3 
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  686 RYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = -3 
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  686 RYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = -3 
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  686 RYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = -3 
Query:  267 KYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 485
            +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  686 RYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = -3 
Query:  258 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 482
            Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  683 YPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = -3 
Query:  258 YGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 482
            Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  683 YPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757
[Close]
BLAST of DN617830 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = -3 
Query:  273 EGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 494
            E   Y   IGPGVYDIHSPR+P T E+   I K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  692 EAFDYPNDIGPGVYDIHSPRVPETAEMVSLIAKAARRIPAERLWVNPDCGLKTRGWPETEAALINMVAAARQLR 765
The following BLAST results are available for this feature:
BLAST of DN617830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURXL1.865e-1653.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP1.865e-1653.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP21.865e-1656.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT2.436e-1656.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM2.436e-1656.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFA2.436e-1656.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF22.436e-1656.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU2.436e-1652.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH2.436e-1652.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM2.436e-1656.765-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617830 ID=DN617830; Name=DN617830; organism=Citrus sinensis; type=EST; length=496bp
TAAAGGTATTCTCATCGATTTACGGCCACTGATAGCAAGCCAGGGGCCTT
TAAAAACGGAAAATACAAGCAAAGAAAAATAGAAGCCAATTGCTCAATAG
TGCATAATATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTAT
TCGAATAGGTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAA
AAAAAAAATCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTC
ACTTGGCACTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATG
TTTGAGAGGGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACA
GTCAGGGTTAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGT
TGATTCTGTCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATG
TCATACACACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCAC
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