DN617829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.013e-57 Identity = 114/177 (64.41%), Postives = 137/177 (77.40%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + +K +RT KS D+YL+LLVKLYR+L RRT+S FN +IL+RLFMS++N+PPLSLSRL MK +E IAVVVGT+T+D+R Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR+KG + R Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGHERAR 176
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.525e-56 Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 565 MGID + +K +RT KS D+YL+LLVKLYR+L RRT++ FN+++L+RLFMS++N+PPLSLSRL MK +E IAVVVGT+T+D R Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVRSKG + Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKGHE 173
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.397e-56 Identity = 110/177 (62.15%), Postives = 139/177 (78.53%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + +K +RT KS DIYL+LLVKLYR+L RRT++ FN+++L+RLFMS++N+PP+S+SRL MK +E IAVVVGTVT+D+R Y++P + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG + R Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKAR 176
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_TAEAS (60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.427e-54 Identity = 111/174 (63.79%), Postives = 134/174 (77.01%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 565 MGID+ K K +R PKS D+YL+L+VKLY+FL RRT S FN ++ +RLFMS++N+ PLSLSRL MK G+E KIAVV+GTVT+DIR EVP L V ALR T AR RI KAGG+ +T DQLAL+APLG+ TVLL+GP+ AREA +HFGPAPGVP SHTKPYV SK R+ Sbjct: 1 MGIDISHRNKRKVVRRN-PKSGDVYLRLMVKLYKFLARRTHSKFNNIVKRRLFMSRINRAPLSLSRLTRQMKKPGREGKIAVVIGTVTNDIRMREVPKLTVCALRVTAGARTRILKAGGKVMTVDQLALKAPLGKGTVLLQGPRKAREACRHFGPAPGVPGSHTKPYVISKSRE 173
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_CAEBR (60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.180e-54 Identity = 108/177 (61.02%), Postives = 134/177 (75.71%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID ++ + ++RTAPKS++ YL+LL KLY FL RRT FN ++LKRL MS+ N+ PLSL+++ +K G E K V + TVTDD R YEVP + + AL TE ARARI AGGE +T DQLALR+P G+NTV L+GP++AREA KHFGPAPGVPHSHTKP+VRSKGRKFER Sbjct: 1 MGID-ISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGEIITLDQLALRSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPHVRSKGRKFER 176
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 209.92 bits (533), Expect = 7.084e-54 Identity = 107/178 (60.11%), Postives = 138/178 (77.53%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDK-IAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + +K +RT PKS D+YL LLVKLYRFL RRT FNK++++RLFMS+ N PP+SL+R+ + MK GK++K +AVV+GTVT+D+R +VP L V ALR T+ AR RI K GG+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+SKGRKFE+ Sbjct: 1 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEK 177
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_CAEEL (60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.251e-54 Identity = 108/177 (61.02%), Postives = 133/177 (75.14%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + + ++RTAPKS++ YL+LL KLY FL RRT FN ++LKRL MS+ N+ PLSL++L ++ G E+K V + TVTDD R Y VP + V AL TE ARARI AGGE +T DQLAL++P G+NTV L+GP++AREA KHFGPAPGVPHSHTKPYVRSKGRKFER Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEIITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFER 176
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.208e-53 Identity = 107/177 (60.45%), Postives = 131/177 (74.01%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + + RTAPKSD++YLKLLVKLY FL RRTD+ FNKV+LK LF+SK+N+PP+S+SR+ +K G +K VVVGTVTDD R +E P V ALRFT ARA+I KAGGEC+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S GRKFER Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFER 174
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53 Identity = 113/179 (63.13%), Postives = 131/179 (73.18%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGK----EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + +KS+R+ P S+++YLKLLVKLYRFL RRTDS FNK ILKRLF SK N+PP+S+S++ K E K V+VGTVTDD R VP L V ALRFT++ARARI KAGGE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVRS+GRKFER Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFER 175
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53 Identity = 112/179 (62.57%), Postives = 132/179 (73.74%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGK----EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + KKS+R+ P S+++YLKLLVKLYRFL RRTDS FNK ILKRLF SK N+PP+S+S++ K ++K VVVGTVTDD R VP L + ALRFT++ARARI KAGGE LT DQLALRAP G NTVL+RG K+AREA +HFG PH H PYVRS+GRKFER Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFER 175 The following BLAST results are available for this feature:
BLAST of DN617829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617829 ID=DN617829; Name=DN617829; organism=Citrus sinensis; type=EST; length=576bpback to top |