DN617829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.336e-52 Identity = 111/178 (62.36%), Postives = 135/178 (75.84%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GK-EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MGID + +K +RT PKS D+YL+LLVKLYRFL RRT FNK+IL+RLFMS+ N+PP+SLSR+ MK GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+SKGRK+E+ Sbjct: 1 MGID-INHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKGRKYEK 177
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_DICDI (60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.907e-48 Identity = 99/165 (60.00%), Postives = 119/165 (72.12%), Query Frame = 2 Query: 83 KKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKG-KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 +K+ R S + Y LLVKLYRFL RRT+S FNKV+LKRL +K N+PP+S+SR+ N MK K KIAV VGTV DD R + P L V ALRFTETAR+RI KAGG+ L+FDQ AL P G NT L++G ARE KHFG APG+P SH +PYVRS+G KF+R Sbjct: 11 RKTGRKTLVSQNPYHALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRPPVSISRIANLMKDRKSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKALSFDQFALVRPRGNNTFLIKGVTKAREVYKHFGRAPGLPGSHARPYVRSEGIKFQR 175
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_TRYBB (60S ribosomal protein L18 OS=Trypanosoma brucei brucei GN=RPL18-A PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.431e-46 Identity = 99/183 (54.10%), Postives = 131/183 (71.58%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFM--------KGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S FNK+I KRL S+ N+ P+SLSR+ M KGK+ IAV+VG V DD+R +PAL++ ALRF+++AR RI AGGECLTFDQLA+ AP G+NT+LLRG K+ RE+VKHFG A GVP SH KP+V S+G++ +R Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLLRGRKSGRESVKHFG-AAGVPGSHAKPHVSSRGKERQR 182
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_THEPA (60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 9.273e-46 Identity = 106/176 (60.23%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRSKGRKFER 574 MGIDLV G+ KK R A S + YL+LLVKLY+FL RRTD +FNKV+LKRL M + K PLSLS+L M+ + D AVVVGTVT+D R VP L V ALR TETAR RI +GGE LTFDQL R+P G LLRG AREAVKHF G P KPYVRSKGRKFE+ Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLYKFLSRRTDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEKRPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHFRNEVKGNP----KPYVRSKGRKFEK 172
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_TRYCR (60S ribosomal protein L18 OS=Trypanosoma cruzi GN=RPL18 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.602e-45 Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--------GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S FNK++ +RL S+ N+ P+SLSR+ MK GK+ IAV+VG V DD+R +PAL+V ALRF+++AR RI AGGECLTFDQLA+ AP G+NT LLRG K+ RE+VKHFG A GVP SH KP+ ++G++ +R Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLAQRTNSAFNKLVHQRLLKSRSNRAPISLSRIAVCMKRKSVWLEKGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSKSARERITGAGGECLTFDQLAMVAPTGKNTFLLRGRKSGRESVKHFG-AAGVPGSHAKPFTSNRGKERQR 182
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_THEAN (60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44 Identity = 102/176 (57.95%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRSKGRKFER 574 MGIDLV G+ KK R A S + YL+LLVKL++FL RRTD FNK++LKRL M + K PLSLS+L M+ + + AVV+GTVT D R VP L V ALR TETAR RI +GGE LTFDQL R+P+G LLRG AREAVKHF G P KPYVRSKGRKFE+ Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLFKFLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHMESRPNNTAVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKAREAVKHFRNEVKGNP----KPYVRSKGRKFEK 172
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_LEIMA (60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.645e-44 Identity = 94/183 (51.37%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--------GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFER 574 MG+DL K + R S + Y+KLL+KLY+FL +RT S FNKV+ +RL S+ N+ P+SLSR+ MK K IAVVVG V DD+R +PA++V ALRF+++AR I AGGECLTFDQLA+ AP G+NT LLRG K+ RE+V+HFG A GVP SH+KPY ++G++ +R Sbjct: 1 MGVDLTGISKKSRVIRHHTYSTNPYIKLLIKLYKFLAKRTSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHFG-ASGVPGSHSKPYATNRGKETKR 182
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_SALSA (60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRR-TDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRS 553 MGI ++ K + + P S+DI LLVK+YR + + + FNKV+L+RLFMS+ ++PP+S+SR+I MK G+E++ AVVVGTVTDD+R +E+P LKV+AL+ T R RI K + + F LAL AP Q +VLL P+NAR+ +HF AP +P HTKPYV S Sbjct: 1 MGI-VIQHNKDRLVRPKQPLSEDI--TLLVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHRPPMSVSRMIRKMKLPGRENRTAVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSIP--HTKPYVLS 165
BLAST of DN617829 vs. ExPASy Swiss-Prot
Match: RL18_PIG (60S ribosomal protein L18 (Fragment) OS=Sus scrofa GN=RPL18 PE=3 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 6.038e-29 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 2 Query: 50 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALR 358 MG+D + K +K +R PKS DIYL+LLVKL RFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+ MK G+E K AVVVGT+TDD+R EVP LKV ALR Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKVCALR 104 The following BLAST results are available for this feature:
BLAST of DN617829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617829 ID=DN617829; Name=DN617829; organism=Citrus sinensis; type=EST; length=576bpback to top |