DN617826

Overview
NameDN617826
Unique NameDN617826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 9.244e-14
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            MNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  325 MNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.059e-13
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  276 PWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 485
            PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  290 PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.059e-13
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  287 INKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.513e-13
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = -2
Query:  276 KTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 497
            K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  284 KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13
Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  276 PWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 485
            PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  320 PWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.992e-13
Identity = 39/78 (50.00%), Postives = 46/78 (58.97%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            MNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  324 MNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.743e-12
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            MNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  287 MNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.743e-12
Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  287 INLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            MNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  317 MNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  287 INRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of DN617826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
ALFC1_ARATH9.244e-1452.56Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF2_PLABA2.059e-1355.71Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALF1_LAMJA2.059e-1348.72Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALFC1_PEA3.513e-1351.35Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ4.588e-1352.86Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_ARATH5.992e-1350.00Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALDOB_CHICK1.743e-1247.44Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOB_BOVIN1.743e-1246.15Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALFC3_ARATH2.277e-1247.44Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALDOC_PANTR2.277e-1239.74Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617826 ID=DN617826; Name=DN617826; organism=Citrus sinensis; type=EST; length=510bp
AAAACATTTATCAATTATAGGGACAAAATCACAGAAATTTAGTGCCATTA
TGGGGAAAGGAAAAAAAAAGAAAAACAAAAACAAAAGCATAAACAGTTTT
CAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTTA
TTGCTCCACCTAAATATGAAAAAGCTCTAAAACTATGAATGAGAATGGGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCACCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATG
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