DN617826

Overview
NameDN617826
Unique NameDN617826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   60 INTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  287 INLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = -2
Query:  315 KTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 497
            K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  278 KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = -2
Query:  276 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 509
            +N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  287 INRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of DN617826 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 32/71 (45.07%), Postives = 39/71 (54.93%), Query Frame = -2
Query:  276 KPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 488
            +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  294 RPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of DN617826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
ALDOC_CHICK4.294e-1139.74Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOB_PONAB4.294e-1143.59Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALFC2_PEA7.324e-1152.46Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_RAT7.324e-1141.03Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOB_RAT7.324e-1145.07Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01L21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617826 ID=DN617826; Name=DN617826; organism=Citrus sinensis; type=EST; length=510bp
AAAACATTTATCAATTATAGGGACAAAATCACAGAAATTTAGTGCCATTA
TGGGGAAAGGAAAAAAAAAGAAAAACAAAAACAAAAGCATAAACAGTTTT
CAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTTA
TTGCTCCACCTAAATATGAAAAAGCTCTAAAACTATGAATGAGAATGGGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCACCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATG
back to top