DN617825

Overview
NameDN617825
Unique NameDN617825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12
Identity = 50/173 (28.90%), Postives = 72/173 (41.62%), Query Frame = 2
Query:  155 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV--IMTYASKYH---DGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            + +V  K+   G+C +D H I   +   ++P++ GHE  G+V  +G  VSKFK GDKV +   +  C  C  C     N C K+  I T  S      DGT  +               +S+  V  E  + +I   APLD    + C   T Y         +PG    V G
Sbjct:   33 DHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKV-IPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFG 204          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 53/167 (31.74%), Postives = 73/167 (43.71%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGT--ITY-----------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  K+   GIC SD H++        +PI+ GHE  GVV  VG  V+  K GDKV +   +  C  C+SC     N C K  +  +    +DGT   TY           G +++  VA E  VV+I   APL+    + C   T Y         +PG    V G
Sbjct:   35 EVRIKILASGICRSDDHVLSGAL-KVNFPIILGHEAAGVVESVGEGVTSMKPGDKV-IPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFG 199          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.025e-11
Identity = 52/180 (28.89%), Postives = 76/180 (42.22%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASK-----------------YHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY------------SPLRFYGLDKPGMHVGV 613
            +V  K+T  G+CH+D   +       ++P+V GHE  G+V  VG  V+ FK GD V +   +  C  C  C     N C K+ +T  +                  +  GT T+  Y  T+VAD   + +I E APL+    L C   T Y            S    +GL   G+ VG+
Sbjct:   37 EVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHV-IALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEY--TVVADIS-LTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGL 212          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 51/167 (30.54%), Postives = 66/167 (39.52%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  KV   G+CH+D + +        +P+V GHE  GVV  VG  V   KVGD V V      CR C  C     N C K+  T       DGT  +               +S   V  +  VV++ + AP D T  L C   T Y           G  +GV G
Sbjct:   36 EVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSV-VLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFG 201          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 46/167 (27.54%), Postives = 72/167 (43.11%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  K+ + G+CH+D + +  +    ++P++ GHE  G+V  VG +V+  +VGD V +      C++C  C     N C ++  T       DGT  +               +S+  V  +  VV I   APLD+   L C   T Y         K G  V V G
Sbjct:   39 EVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPV-IALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVFG 204          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--------ASKYH-DGTITY-----GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            +V  K+   GICH+D + +       ++P V GHE  G+V  VG  V+KFK GD V +   V  C  C  C     N C K+ +T          S++  +G + +       +S+  V  E  + ++ E APLD    L CA  T Y
Sbjct:   35 EVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAV-IPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGY 181          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 50/167 (29.94%), Postives = 70/167 (41.92%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASK-YHDGTI-------------TYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  ++   G+C SD HL+  +   A +P++ GHE  G+VTEVG  V  F  GD V V   + SC  C SC   + N C       A +   DG+                G +S  MV     VV+I    P +    + C   T Y         +PG  V +VG
Sbjct:   29 EVKIQMEAAGMCRSDHHLVTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHV-VLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVG 194          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 50/167 (29.94%), Postives = 70/167 (41.92%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASK-YHDGTI-------------TYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  ++   G+C SD HL+  +   A +P++ GHE  G+VTEVG  V  F  GD V V   + SC  C SC   + N C       A +   DG+                G +S  MV     VV+I    P +    + C   T Y         +PG  V +VG
Sbjct:   29 EVKIQMEAAGMCRSDHHLVTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHV-VLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVG 194          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  158 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            K+V  K+   GIC +D H+IK    +  +P++ GHE VGVV  VG  V+  + GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V ++   AP +    + C   T Y
Sbjct:   35 KEVRVKILATGICRTDDHIIKGSMVSK-FPVIVGHEAVGVVESVGEGVTTVRPGDKV-IPLFLPQCRECNACLNPEGNLCIRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGY 180          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 48/167 (28.74%), Postives = 72/167 (43.11%), Query Frame = 2
Query:  158 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K+V  K+   GIC +D H+IK    +  +P++ GHE VG+V  VG +V+  + GDKV +   +  CR C+ C     N C +  +T      DGT  +               +++  V DE  V +I   AP +    + C   T Y          PG    V G
Sbjct:   35 KEVRVKILATGICGTDDHVIKGTMVSK-FPVIVGHEAVGIVESVGEEVTTVRPGDKV-IPLFLPQCRECNPCRNPEGNLCIRSDLTGRGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFG 199          
The following BLAST results are available for this feature:
BLAST of DN617825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH4_STRCA6.009e-1228.90Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_UROHA7.848e-1231.74Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHX_DROME1.025e-1128.89Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
FADH_PICPA2.982e-1130.54S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
FADH2_SCHPO2.982e-1127.54Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADHL_GADMO2.982e-1131.08Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHB_MYCTU2.982e-1129.94Alcohol dehydrogenase B OS=Mycobacterium tuberculo... [more]
ADHB_MYCBO2.982e-1129.94Alcohol dehydrogenase B OS=Mycobacterium bovis GN=... [more]
ADH7_MOUSE2.982e-1129.73Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH7_RAT5.087e-1128.74Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617825 ID=DN617825; Name=DN617825; organism=Citrus sinensis; type=EST; length=621bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTT
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