DN617825

Overview
NameDN617825
Unique NameDN617825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7471 contig Csv1_Contig7471:12..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.044e-56
Identity = 100/184 (54.35%), Postives = 128/184 (69.57%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E  +   GWAARD SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP+VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y   Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  G++G
Sbjct:    5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.780e-56
Identity = 100/184 (54.35%), Postives = 131/184 (71.20%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E  +   GWAARD SGVLSP+ ++ R TG +DV  +V  CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS+V+KF+ GD VGVGC+VGSC +C  C  D+E YC K I +Y   Y DG  T GG++  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL + G+  G++G
Sbjct:    5 EVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.791e-55
Identity = 95/180 (52.78%), Postives = 128/180 (71.11%), Query Frame = 2
Query:   80 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            N   WAARD SG+LSP+ F+RRA    DV+ ++THCG+C++D+   +N   N++YP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SCR C++C   LENYC + + T+     DGT+T GGYS  +V  E +  +IP+G PL+  APLLCAGITVYSP+  + +++PG  +GV+G
Sbjct:    9 NCDAWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54
Identity = 99/184 (53.80%), Postives = 128/184 (69.57%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+  G++G
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.181e-54
Identity = 96/181 (53.04%), Postives = 126/181 (69.61%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +   GWAARD +G LSP+ ++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ TMV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+  G++G
Sbjct:    8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.181e-54
Identity = 101/191 (52.88%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   47 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            MG     E  K   GWAARD +G LSP+ ++ R TG +DV  KV +CGICH+DLH  KN  G + YP+VPGHE+VG V EVG +VSK+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ +MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+  G++G
Sbjct:    1 MGSVDASE--KTITGWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILG 189          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.181e-54
Identity = 98/184 (53.26%), Postives = 128/184 (69.57%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E  +   GWAARD SGVLSP+ +S R TG +D+  KV  CG+CHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+  G++G
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 2.849e-54
Identity = 96/184 (52.17%), Postives = 132/184 (71.74%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E  +   GWAA D++G L+P+ +S R TG +DV  KV  CG+CH+D+H IKN+ G + YP+VPGHE+VG V EVGS V++FKVGD VGVG +VGSC++C  C  ++E YC K I +Y   Y DG  T GG++++MV  + FVVRIP+G   +  APLLCAG+TVYSPL+ +GL + G+  G++G
Sbjct:    5 ETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILG 188          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.721e-54
Identity = 95/181 (52.49%), Postives = 131/181 (72.38%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +   G AA+D SG+L+P+ ++ R TG  DV  K+ +CG+CHSDLH IKN+ G + YP+VPGHE+VG V EVGS V++FKVG+ VGVG +VG C+SC +C  ++E YC K I +Y   Y DG IT GG++++ V ++ FVV+IPEG   +  APLLCAG+TVYSPL  +GL  PG+  G++G
Sbjct:    9 RTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILG 189          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.859e-54
Identity = 100/185 (54.05%), Postives = 130/185 (70.27%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVG 619
            E  +   GWAARD SGVLSP+ ++ R TG +DV  K+ +CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS V+KFKVGD VG G +VG C++C  C  D+E YC K I +Y   Y DG  T GG+S  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL +  G+  G++G
Sbjct:    5 EAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILG 189          
The following BLAST results are available for this feature:
BLAST of DN617825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
CADH5_ARATH3.044e-5654.35Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH1_OCIBA6.780e-5654.35Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_ORYSJ9.791e-5552.78Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH_EUCGL1.670e-5453.80Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_MAIZE2.181e-5453.04Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_LOLPR2.181e-5452.88Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH2_EUCGU2.181e-5453.26Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_POPDE2.849e-5452.17Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_MEDSA3.721e-5452.49Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_ARACO4.859e-5454.05Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617825 ID=DN617825; Name=DN617825; organism=Citrus sinensis; type=EST; length=621bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTT
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