DN617825

Overview
NameDN617825
Unique NameDN617825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7471 contig Csv1_Contig7471:12..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19
Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 2
Query:  173 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   KVGD+V +  M  +C +C+ C    E  C  V+       + G    G  ++ ++ D ++ V++PE     A + + CAG+T Y  ++  G++ PG  +GV G
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIE-PGQWLGVFG 169          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            ++   V + G+CH+DLH  K +W  +   P+V GHE  GVV  +G  V+ +++GD  G+  + GSC  C+ C    E+ CP   +  +   HDG+     +     AD     RIP+G  L   AP+LCAGITVY  L+   L + G  V V G
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADL--SGYTHDGS-----FQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALKTAQL-QAGQWVAVSG 178          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV ++GS V  +KVGD  G+  + GSC +C+ C    E+ CP   +  +   HDG+     +     AD     +I +G  L   AP+LCAG+TVY  L+   L K G  V + G
Sbjct:   60 EILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNCPDADL--SGYTHDGS-----FQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVYKALKEADL-KAGDWVAISG 205          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            ++   V + G+CH+DLH  K +W  +   P+V GHE  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K  +  +   HDG+     +     AD     R+P+G  L   AP+LCAGITVY  L+   + +PG  V + G
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADL--SGYTHDGS-----FQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALKTAQI-QPGNWVCISG 178          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            ++   V + G+CH+DLH  K +W  A   P+V GHE  GVV  +G  V  +KVGD  GV  + GSC +C+ C    E  C +  +  +   HDG+     +     AD     RIP G  L   AP+LCAG+TVY  L+   L+  G  V + G
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADL--SGYTHDGS-----FQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELE-AGQWVAISG 178          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 574
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP+G  L   AP+LCAGITVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK 164          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 2.975e-19
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 574
            ++   V + G+CH+DLH    +W      P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     + +   AD      IP+G  L   AP+LCAGITVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALK 164          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 45/149 (30.20%), Postives = 80/149 (53.69%), Query Frame = 2
Query:  173 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V ++   V   KVGD+V +  M  +C +C+ C    E  C  V+       + G    G  ++ ++ D ++ V++PE     A + + CAG+T Y  ++  G++ PG  +GV G
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIE-PGQWLGVFG 169          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  152 GEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            G   V  K    G+CH+DLH  K +W      P +PGHE VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C        S+ + G    G ++   +AD  FV R+P        AP+LCAG+TVY  L+   + +PG  V V G
Sbjct:   26 GPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC-------GSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSG 174          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.477e-18
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  152 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPG----HEIVGVVTEVGS--KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            G+ +V   +TH G+CHSD  ++ N W    +P  PG    HE VG V ++G+  + S  K+GD+VGV  +  +C  C  C    +  C        ++   G  T G +   ++    +V  IP+G P    APLLCAG+TVY+ L+     +PG  + + G
Sbjct:   34 GDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLC-------FNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK-RSKAQPGQWIVISG 187          
The following BLAST results are available for this feature:
BLAST of DN617825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH_STAEQ1.023e-1931.54Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH2_PICST1.023e-1936.36Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH3_YEAST1.336e-1935.71Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH1_PICST1.336e-1935.71Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH2_CANAL1.744e-1937.01Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH1_YEAST1.744e-1935.97Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH2_YEAST2.975e-1935.97Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH_STAES3.886e-1930.20Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADHA_RHIME5.075e-1935.67Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH2_EMENI1.477e-1832.72Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617825 ID=DN617825; Name=DN617825; organism=Citrus sinensis; type=EST; length=621bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTT
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