DN617825

Overview
NameDN617825
Unique NameDN617825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7471 contig Csv1_Contig7471:12..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17
Identity = 47/156 (30.13%), Postives = 80/156 (51.28%), Query Frame = 2
Query:  155 EKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            E ++  K+ + GICHSDLH  + ++  A I P++ GHE  G V  +GSKV  + +GD+ G+  +  +C +C+ C    E  C  +        + G   +G + + +   +   +++     L A AP+LC G+T Y  L+   + KPG  V + G
Sbjct:   34 ENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI-------QNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNV-KPGQIVVLTG 181          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHP_ECOLI (Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16
Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 2
Query:  143 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            R+    +   K+  CG+CH+DLH+   ++G+    ++ GHE +GVV EVG  V+  K GD+  V      C  C+ C    E  C  V        + G    GG ++  +    + V++P+G    A + + CAG+T Y  ++   + +PG  + + G
Sbjct:   20 RSLKHGEALLKMECCGVCHTDLHVKNGDFGDKT-GVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSV-------KNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKI-RPGQWIAIYG 169          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADHA_MYCTU (Probable alcohol dehydrogenase adhA OS=Mycobacterium tuberculosis GN=adhA PE=3 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.021e-16
Identity = 54/150 (36.00%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  185 CGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS-----KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            CG+C +DLH+ + +       ++PGHE+VG V EVGS V      +F  GD+VG+  +  +C  C  C    EN CP+      S+Y  G    GGY++       F   +P G      APLLCAGI  Y  L    L  PG  +G+ G
Sbjct:   48 CGVCRTDLHVTEGDLPVHRERVIPGHEVVGEVIEVGSAVGAAAGGEFDRGDRVGIAWLRHTCGVCKYCRRGSENLCPQ------SRY-TGWDADGGYAEFTTVPAAFAHHLPSGYSDSELAPLLCAGIIGYRSLLRTEL-PPGGRLGLYG 189          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 41/153 (26.80%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +   ++ +CG+CH+DLH+   ++G+    I  GHE +G+V +VG  V+  KVGD+  V      C  C+ C    E  C  V        + G    G  ++  +    + V++P+G      + + CAG+T Y  ++   + +PG  + + G
Sbjct:   26 EALLEMEYCGVCHTDLHVKNGDFGDETGRIT-GHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNV-------ENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVKVSQI-QPGQWLAIYG 169          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 2
Query:  155 EKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR 574
            + ++  K+ + GICHSDLH+   +  + ++ P+V GHE  G V ++G  V+ +++GDK GV  M  +C +C+ C    E  C   I  Y     D + T+  Y      D     +I +   L A AP+LCAG+TVY  L+
Sbjct:   33 DDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHH-IQNYG---FDRSGTFQEYLTIRGVD---AAKINKDTNLAAAAPILCAGVTVYKALK 166          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14
Identity = 54/167 (32.34%), Postives = 74/167 (44.31%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK--------VIMTYASKYH------DGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            +V  K+   GIC SD H+I     +  +P++ GHE  GVV  VG  V+KFK GDKV +   V  C  C  C     N C K        V++   S++          I+   +++  V DE  V +I E APL+    + C   T Y      G  KPG    V G
Sbjct:   35 EVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKV-IPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLLDKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFG 200          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.095e-13
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 2
Query:  152 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI------YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYASKYHDGTITYGGYSD-TMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            G   V  KV + G+CH+DL +      N I       P+V GHEI G V E+G  V  FK  DKV +   +G   SC  C I  + YC  PK +         G    GGY +  +V D  ++ ++         +PL C+G+T Y  LR   LD P   V ++G
Sbjct:   24 GVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGD-GSCHYCKIGEDQYCDNPKWL---------GINVNGGYGEYVLVPDYRYMFKL-RNLSTSTASPLACSGVTAYRALRLANLD-PSKSVMIIG 176          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 2
Query:  155 EKDVTFKVTHCGICHSDLHLIKN------------EWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC--------------RSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATA 532
            + +V   V+ CGIC SDLH   +            +  NA  P+  GHE+ G+V++VG KV+K KVGD V V     SC              + CD+C    EN C     T+A     G I+ GG+++ +V  +H ++ +P+  PLD  A
Sbjct:   26 DDEVIIDVSWCGICGSDLHEYLDGPIFMPKDGECHKLSNAALPLAMGHEMSGIVSKVGPKVTKVKVGDHVVVDA-ASSCADLHCWPHSKFYNSKPCDACQRGSENLC-----THAGFVGLGVIS-GGFAEQVVVSQHHIIPVPKEIPLDVAA 170          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12
Identity = 48/167 (28.74%), Postives = 73/167 (43.71%), Query Frame = 2
Query:  158 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGT-------------ITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K+V  K+   G+C +D+  +  +  +   P++ GHE VG+V  VG  VS  + GDKV + C +  C  C +C     N C ++ ++      +GT             I  G +S+  V  E  V +I EGAPL+    + C   T Y          PG    V G
Sbjct:   35 KEVRIKMVATGVCGTDIKHLDTQELSKFCPMIMGHEGVGIVESVGEGVSSVRTGDKVILLC-IPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVFG 200          
BLAST of DN617825 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.065e-12
Identity = 49/167 (29.34%), Postives = 74/167 (44.31%), Query Frame = 2
Query:  158 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 619
            K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V +I + AP +    + C   T Y      G  KPG    V G
Sbjct:   35 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG 199          
The following BLAST results are available for this feature:
BLAST of DN617825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH2_CAEEL6.204e-1730.13Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
ADHP_ECOLI3.079e-1628.30Alcohol dehydrogenase, propanol-preferring OS=Esch... [more]
ADHA_MYCTU4.021e-1636.00Probable alcohol dehydrogenase adhA OS=Mycobacteri... [more]
ADH1_ZYMMO1.294e-1426.80Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
ADH1_CAEEL1.294e-1434.04Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
ADH1_RANPE6.420e-1432.34Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH_SULAC1.095e-1333.33NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
BDH1_YEAST2.440e-1332.89(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
ADH6_RAT1.211e-1228.74Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH7_HUMAN2.065e-1229.34Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617825 ID=DN617825; Name=DN617825; organism=Citrus sinensis; type=EST; length=621bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTT
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