DN617822

Overview
NameDN617822
Unique NameDN617822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617822_ssr297 microsatellite DN617822_ssr297:297..308. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10452 contig Csv1_Contig10452:82..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_ASPOR (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus oryzae GN=egd2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-18
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMP--------------DMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q                  D+G+ + + +                      E +DI+LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   54 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHEHDLGTKVPEAE----TKKEEEEDDGEPVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.215e-18
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRM-------------PDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KL +  + G++RVT++R KNILF I+ P+V+KSPNS TY++FGEAKIED           Q                P       +                        E +DI+LVMTQA VSR+KAVKALK ++ DIV++IM L+
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNAAAQQAAAAQLASQNAEDHSGHNHGEPSKAVEADEKKEDKEDDEDEEEEEEEEVDASGLEDKDIELVMTQANVSRNKAVKALKENDNDIVNSIMALS 208          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.215e-18
Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = -1
Query:  133 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVM----------------AKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 540
            KLGMKPV GV++V IK++K I F ++KPDV+K PNS+TYVIFGEAK+ED             R+  + S +                A                            DIDLV++Q G +R +AV+AL  + GDIV  IM+L+T
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQ--RLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLST 197          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_BOTFB (Nascent polypeptide-associated complex subunit alpha OS=Botryotinia fuckeliana (strain B05.10) GN=egd2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.380e-17
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPD----MGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            ++ KLG+  V G++RVT++R KNILF I++P+V+KSP S TY++FGEAKIED           Q    +     G   +  D                      +  ++D          LVMTQA VSR+KAVKALK ++ DIV++IM L+
Sbjct:   60 SIAKLGLTRVPGITRVTLRRPKNILFVINQPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTEEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 211          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_NEOFI (Nascent polypeptide-associated complex subunit alpha OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17
Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q    +  +   A  D                      +  ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17
Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q    +  +   A  D                      +  ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_ASPCL (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus clavatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP S T++IFGEAKIED           Q    +  +   A  D                      +  ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPTSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16
Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q       +  A  D                      +  ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNATAQATAAQQL-AEAAANEHAGHDHEHDHGKGKAPEAEAKKEEEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = -1
Query:  136 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDM--GSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDI---------DLVMTQA--GVSRSKAVKALKTHNGDIVSAIMELT 549
            A+ KLG+K V G++RVT++R K ILF I++PDV++SP+S T++IFGEAKIED           Q    +    +  A  D                      +  ++         D+ +  A   VSR+KA+KALK ++ DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGSNEHAGHDHASHDHGKGKAVESADKKDEEEDDEEVFDASGLEAKDIELVMAQASVSRNKAIKALKENDNDIVNSIMALS 207          
BLAST of DN617822 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.274e-12
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = -1
Query:  394 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 549
            ++ KLG+  V G++RVT++R KNILF I+ P+V+KSP S TY++FGEAKIED
Sbjct:   61 SIAKLGLTRVPGITRVTLRRPKNILFVINNPEVYKSPTSNTYIVFGEAKIED 112          
The following BLAST results are available for this feature:
BLAST of DN617822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
NACA_ASPOR3.057e-1838.82Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE5.215e-1838.41Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI5.215e-1837.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOTFB3.380e-1737.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEOFI7.531e-1738.26Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPFU7.531e-1738.26Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPCL9.836e-1738.26Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC1.678e-1638.51Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN2.961e-1334.44Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCLS13.274e-1259.62Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617822 ID=DN617822; Name=DN617822; organism=Citrus sinensis; type=EST; length=594bp
TTTTTTTTTTTTTGTATCTGCAACAGAAATTGTATTAAGTGCACAAAAAT
AGAGTAGTAATTCAGTCATCTCACCGACTACAATAACTAAATTCATCGAC
AGAAAAATACTGCATGGAAGCAAATCTACTCAAGTAGTAAGCTCCATGAT
AGCACTAACAATGTCTCCATTATGTGTCTTCAGAGCTTTGACAGCCTTGC
TTCTTGAGACACCAGCCTGTGTCATGACCAAATCAATGTCCCGAGGCTCA
ACTCCCGTCTCATCAACTTCCTCCTCTTCCTCATCTTGTTGTGCACCAGC
AGCAGCAGAAGAGGCATCTGGTTTCGCCATCACCGATCCCATGTCAGGCA
TCCTGAACTGCTGGGCAGCCTGTGTCTGCAGCTGGGTGCTCAAATCCTCT
ATTTTGGCTTCCCCAAATATGACGTATGTTTCAGAATTTGGGCTCTTGAA
AACATCAGGCTTTGAGATGAAAAATAGTATATTTTTGGTTCTCTTGATGG
TTACCCTGCTAACTCCTGTTACAGGTTTCATGCCCAACTTCAGCATTGCC
TTGCGGCTCTTTTTCTCACTTCTGCTCTGCTTTGAACTCCCACC
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