DN617809

Overview
NameDN617809
Unique NameDN617809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12382 contig Csv1_Contig12382:868..1462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22
Identity = 49/140 (35.00%), Postives = 87/140 (62.14%), Query Frame = -1
Query:  176 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDEC-YDMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 592
            ++D++KR YSN  +    VA+  FWD +D EG+S+W+ +Y++ +E T++F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG ++   + D+   D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  294 VMDEFKRKYSNEDT--MTVALPYFWDHFDREGFSIWYAEYRFPEELTMAFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDLAFPLSDDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.326e-21
Identity = 53/151 (35.10%), Postives = 85/151 (56.29%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D S EE +  V +       F+  G+A    K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQELAFPLSPDWQVDYESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 52/151 (34.44%), Postives = 85/151 (56.29%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A+   K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = -1
Query:  209 LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQ 589
            +DD+KR YSN   N    +I  FW+ +D E YS+W+ +YKY DE    +++ N ++G  QR++  RK AF  + + G +    + G+W++RG ++  K   D   D E YDWKK D   +E K+ V Q
Sbjct:  285 MDDFKRFYSN---NEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDWKKLDPDAQETKDLVTQ 409          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEEAQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = -1
Query:  209 DDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQ 586
            DD+KR+YSN        +I  F+D +D E YS+WF +YKYN+E +  F++ N ++G  QR+D  RK AF  + + G +    + G+W++RG ++      D   D E+YDWKK D   EE K+ V Q
Sbjct:  287 DDFKRVYSNEDE---AKSIPYFFDKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQ 410          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 51/151 (33.77%), Postives = 85/151 (56.29%), Query Frame = -1
Query:  149 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 592
            +LD++KR YSN  +    VA+  FW+ +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG ++      D   D E Y W+K D   EE +  V +       F+  G+A+   K FK
Sbjct:  289 VLDEFKRKYSNEDT--LSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDLAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 437          
BLAST of DN617809 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 49/141 (34.75%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  176 ILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 592
            I+D++KR YSN  +    VA+  FW+ +D EG+S+W+ +YK+ +E T +F++ N ++G  QR+D  RK  F  +++ G      + G+W+FRG ++  F + E +  D E Y+W+K D   EE K     +++++  +EGE
Sbjct:  288 IMDEFKRKYSNEDT--LTVALPYFWEHFDKEGWSIWYAEYKFPEELTQAFMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDL-AFTLSEDWQIDYESYNWRKLDSGSEECK----TLVKEYFAWEGE 421          
The following BLAST results are available for this feature:
BLAST of DN617809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G_DANRE4.558e-2235.00Elongation factor 1-gamma OS=Danio rerio GN=eef1g ... [more]
EF1G_RABIT1.326e-2135.10Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_MOUSE2.955e-2134.44Elongation factor 1-gamma OS=Mus musculus GN=Eef1g... [more]
EF1G_ARTSA3.859e-2137.50Elongation factor 1-gamma OS=Artemia salina PE=1 S... [more]
EF1G_MACFA5.040e-2134.44Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HUMAN5.040e-2134.44Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
EF1G_HORSE5.040e-2134.44Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_DROME5.040e-2139.37Elongation factor 1-gamma OS=Drosophila melanogast... [more]
EF1G_RAT6.582e-2133.77Elongation factor 1-gamma OS=Rattus norvegicus GN=... [more]
EF1GA_XENLA6.582e-2134.75Elongation factor 1-gamma-A OS=Xenopus laevis GN=e... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L12_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617809 ID=DN617809; Name=DN617809; organism=Citrus sinensis; type=EST; length=595bp
TTTTTTTTTTTTTTTTAAATTATAAGTTAATACTATAACACAAAATACTA
GACTTCGATCTTTCTGAATTCGAAACACAAACAAACTCTACCAATAACCA
AAGACAAACATGAACATCTTAAAACTAGAAAAAAGATTAAGCTCATCACT
TGAAGCACTTAGCATCCAAAAGAGCTTCACCCTCAAAAGGCTCGTGATCC
TCGATCATCTGGTTCACACGTTCCTTTTGCTCTTCGTCTGAGATGTCAGC
CTTCTTCCAGTCATACAATTCCATGTCATAGCACTCATCCATGACGAATT
TAGGAATTTCTGGGCCACGGAAGAGCCACAACCCCTTGACTTTGTATGGA
GGCTCGTTGCCGATAATTAGCATCTTTCCAAACGCATACTTGCGAGCCAG
ATCCATCCTCTGAAGAAACCCACTAACCTTGTTCAAGGTCACGAATGACA
CAGTATTCTCGTCATTGTATTTGTAATCACAGAACCAAAGTGAGTAACCC
TCAGGATCATACATGTCCCAGAATCCTTTAATTGCAACTTCACGGAAGTT
GGACTTCGTGTTTGAGTAAAGCCTCTTCCAGTCATCCAGAATCAT
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