DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43 Identity = 81/141 (57.45%), Postives = 113/141 (80.14%), Query Frame = -1 Query: 164 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 586 GKL E+TM++K+ +N+HF SFNTICDATQERQDAM ++VE ++L++V+GG+NSSNT+ LQ+IA +R IPSY ID+ +RI G+ I ++ ++G+L+ ENWLP G+I +GITSGASTPDK VEDV++K+F +K AL Sbjct: 261 GKLFERTMLQKYSPIELNQHFQSFNTICDATQERQDAMLELVEHNLNLMVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDGEIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_MICAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=ispH PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43 Identity = 80/136 (58.82%), Postives = 112/136 (82.35%), Query Frame = -1 Query: 179 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 586 GKL E TM+RK+G + +HF+SFNTICDATQERQDA++++V+E + L++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G+I +G+TSGASTPDK VE+V++K+F K Sbjct: 261 GKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAIFELVKEPLSLMVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKVVEEVIEKIFAFK 396
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.179e-42 Identity = 84/141 (59.57%), Postives = 108/141 (76.60%), Query Frame = -1 Query: 164 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 586 GKL E TM++K+G ++N HF+SFNTICDATQERQDAM +V+EK+DL++V+GG+NSSNT+HLQEI+ GI SY IDS RI N I +K + +L KENWLP G+I +G+TSGASTPD VE VL+K+F IK A+ Sbjct: 261 GKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAM 401
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42 Identity = 77/139 (55.40%), Postives = 112/139 (80.58%), Query Frame = -1 Query: 179 RDGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE-LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 592 R GKL E+TMMR++G N+ +HF+S +TICDATQERQDAM+K+VEE +DL++V+GG+NSSNT+HLQEIA +RG+PS+ ID R+ I ++ +H + LV +NWLP G++T+G+T+GASTPD+ V +V+ ++FE+K Sbjct: 253 RIGKLFERTMMRRYGPANLADHFMSHDTICDATQERQDAMFKLVEEPLDLLVVIGGYNSSNTTHLQEIAVERGLPSFHIDGADRLVSAQFIEHRDLHSKSLVRTKNWLPAGEVTVGVTAGASTPDRVVAEVIARIFELK 391
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41 Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = -1 Query: 170 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 586 GKL E TM++K+G +N+HF+SFNTICDATQERQDAM ++V+EK+DL++V+GG+NSSNT+HLQEI +GI SY ID+ RI P N I +K + +L KENWLP+G I +GITSGASTPD VE V++K+F K E Sbjct: 261 GKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDLMVVIGGFNSSNTTHLQEIPIYQGITSYHIDNATRIKPNNCIEHKPLGKDLEIKENWLPEGSIVVGITSGASTPDIIVEAVIEKIFSAKELE 399
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNR3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain RCC307) GN=ispH PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.570e-41 Identity = 79/144 (54.86%), Postives = 115/144 (79.86%), Query Frame = -1 Query: 155 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 586 G+L E+T++R++G ++N+HF++FNTICDATQERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGIPS ID+ +RIGPGN + +K + +L E +LP+G + IGITSGASTPD+ VE V+ ++ ++ EA Q+A Sbjct: 261 GRLFERTLLRRYGPTDLNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQEIAVSRGIPSVHIDAPERIGPGNAVEHKPLGQDLERLEPFLPEGDLRIGITSGASTPDRVVEGVIDRLLQL--AEAGQIA 402
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40 Identity = 78/141 (55.32%), Postives = 112/141 (79.43%), Query Frame = -1 Query: 167 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 586 G+L EKTM+RK+G + EHF++FNTICDAT+ERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L+ ++N+LP+G I++GITSGASTPD+ VE V+ K+ + E+A Sbjct: 261 GRLFEKTMLRKYGPAELTEHFLAFNTICDATEERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDQENTITHKPLGDDLITEKNFLPEGNISVGITSGASTPDRVVEHVIHKLINLSEEKA 401
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.666e-40 Identity = 76/138 (55.07%), Postives = 108/138 (78.26%), Query Frame = -1 Query: 173 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 586 G+L E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA +RGI S+ ID+ +RI N I +K + EL+ + +LP G +T+GITSGASTPD+ VE V++++ + E Sbjct: 261 GRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQEIAINRGIRSFHIDTPERISADNSIEHKPLGQELIRELEFLPSGTVTVGITSGASTPDRVVEHVIQRLISLSEE 398
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.080e-39 Identity = 76/135 (56.30%), Postives = 107/135 (79.26%), Query Frame = -1 Query: 182 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 586 G+L E+TM+ K+G ++NEHF++FNTICDATQERQDAM+ +V+E VDL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI N I +K + EL +E +LP G +T+GITSGASTPD+ VE V++++ + Sbjct: 261 GRLFERTMLSKYGPTDLNEHFLAFNTICDATQERQDAMFSLVDETVDLMVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIHTDNSIEHKPLGEELTVEELFLPSGPVTVGITSGASTPDRVVEHVIQRLIAL 395
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.080e-39 Identity = 77/136 (56.62%), Postives = 109/136 (80.15%), Query Frame = -1 Query: 182 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 586 GK+ E+TM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+++V+GG+NSSNT+HLQEIA + I S+ ID+ +RI N I +K + EL K+N+LP G+I +GITSGASTPDK V DV++K+ +I Sbjct: 261 GKVFERTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQEIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKKNFLPSGKINVGITSGASTPDKVVADVIEKLIDI 396 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |