DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38 Identity = 78/137 (56.93%), Postives = 108/137 (78.83%), Query Frame = -1 Query: 182 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAY-KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 586 G+L EKTM+++FG +NEHF++ NTICDAT+ERQ AM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L G I++GITSGASTPD+ VEDV+ K+ +I Sbjct: 261 GRLFEKTMLQRFGPAQLNEHFLAINTICDATEERQGAMFSLVDEPLDLMVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38 Identity = 78/137 (56.93%), Postives = 108/137 (78.83%), Query Frame = -1 Query: 182 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAY-KLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 586 G+L EKTM+++FG +NEHF++ NTICDAT+ERQ AM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L G I++GITSGASTPD+ VEDV+ K+ +I Sbjct: 261 GRLFEKTMLQRFGPAQLNEHFLAINTICDATEERQGAMFSLVDEPLDLMVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.016e-37 Identity = 73/136 (53.68%), Postives = 106/136 (77.94%), Query Frame = -1 Query: 182 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 586 G++ E+TM+ K+G ++NEHF+++NTICDATQERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ RI N I +K + +L + +LP G +T+GITSGASTPD+AVE V++K+ + Sbjct: 261 GRMFERTMLSKYGPADLNEHFLAYNTICDATQERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQEIAVSRGIRSFHIDTPDRIDETTNSIEHKPLSEDLKRDQVFLPAGPVTVGITSGASTPDRAVEAVIEKLMRL 396
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_BORPE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Bordetella pertussis GN=ispH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K++ + DL+LVVG NSSN++ L+E+AE +G+ +Y ID I P WL +G+ +IGIT+GAS P+ V+ V+++V E+ Sbjct: 202 ICYATQNRQDAV-KLLAPECDLVLVVGSTNSSNSNRLREVAERKGVAAYLIDGAHAIDPA-----------------WL-QGRRSIGITAGASAPEVLVQQVVERVREL 291
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_BORPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Bordetella parapertussis GN=ispH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K++ + DL+LVVG NSSN++ L+E+AE +G+ +Y ID I P WL +G+ +IGIT+GAS P+ V+ V+++V E+ Sbjct: 203 ICYATQNRQDAV-KLLAPECDLVLVVGSTNSSNSNRLREVAERKGVAAYLIDGAHAIDPA-----------------WL-QGRRSIGITAGASAPEVLVQQVVERVREL 292
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_BORBR (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Bordetella bronchiseptica GN=ispH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K++ + DL+LVVG NSSN++ L+E+AE +G+ +Y ID I P WL +G+ +IGIT+GAS P+ V+ V+++V E+ Sbjct: 203 ICYATQNRQDAV-KLLAPECDLVLVVGSTNSSNSNRLREVAERKGVAAYLIDGAHAIDPA-----------------WL-QGRRSIGITAGASAPEVLVQQVVERVREL 292
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_THETN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter tengcongensis GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13 Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = -1 Query: 170 EHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 532 + + FNTIC+ATQ+RQ+A + +KVD++ V+GG +SSNT L++I E +Y I+ ++I ++++ KG IGIT+GASTPD +E+V++K+ +K E+ Sbjct: 184 KELVYFNTICNATQKRQEAA-DALSKKVDVMFVIGGKHSSNTQKLRKICEKNCKNTYHIER------ADEITFEML------------KGHDIIGITAGASTPDYVIEEVIEKIKSLKGED 285
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_THEPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter sp. (strain X514) GN=ispH PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = -1 Query: 170 ISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 523 I FNTICDATQ+RQDA ++ +KVD++ V+GG +SSNT L++I E ++ I+ + + E+V K IG+T+GASTPD +EDV+KK+ +K E+ Sbjct: 187 IFFNTICDATQKRQDAADEL-SKKVDVMFVIGGKHSSNTQKLKKICEKNCKNTFHIEDAEELTL-----------EMV-------KDHEIIGVTAGASTPDYVIEDVIKKIRFLKGED 285
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_THEP3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ispH PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = -1 Query: 170 ISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 523 I FNTICDATQ+RQDA ++ +KVD++ V+GG +SSNT L++I E ++ I+ + + E+V K IG+T+GASTPD +EDV+KK+ +K E+ Sbjct: 187 IFFNTICDATQKRQDAADEL-SKKVDVMFVIGGKHSSNTQKLKKICEKNCKNTFHIEDAEELTL-----------EMV-------KDHEIIGVTAGASTPDYVIEDVIKKIRFLKGED 285
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_MARAV (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ispH PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = -1 Query: 155 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 508 IC ATQ RQDA+ K + D++LVVG NSSN++ L+E+AE G P+Y ID +I P WL G+ IG+T+GAS P+ V DV+K++ + EE ++++ Sbjct: 197 ICYATQNRQDAV-KQLAGDCDIMLVVGSPNSSNSNRLRELAERMGTPAYLIDEAAQIDPA-----------------WL-YGKKAIGVTAGASAPEVLVADVIKRLKALGGEEPVEVS 295 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |