DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CLOPE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens GN=ispH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 182 VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 547 + ++ ++FNTIC AT RQ ++ ++ +E DL+ V+GG NSSNT+ L EI + SY I++ K + L+ E V+ TIGIT+GASTPD + +V+ K+ E+ Sbjct: 178 IVRASKEIVAFNTICSATDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDE------SLLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CLOP1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ispH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 182 VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 547 + ++ ++FNTIC AT RQ ++ ++ +E DL+ V+GG NSSNT+ L EI + SY I++ K + L+ E V+ TIGIT+GASTPD + +V+ K+ E+ Sbjct: 178 IVRASKEIVAFNTICSATDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDE------SLLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_XYLFT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 182 NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 514 N IC ATQ RQDA+ ++ E DL+LVVG NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T+GAS P V+ VL +++E+ Sbjct: 196 NDICYATQNRQDAVRELARE-CDLVLVVGSPNSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVTAGASAPQVLVDGVLARLYEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_XYLFM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Xylella fastidiosa (strain M12) GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 182 NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 514 N IC ATQ RQDA+ ++ E DL+LVVG NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T+GAS P V+ VL +++E+ Sbjct: 196 NDICYATQNRQDAVRELARE-CDLVLVVGSPNSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVTAGASAPQVLVDGVLARLYEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_XYLFA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Xylella fastidiosa GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 182 NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 514 N IC ATQ RQDA+ ++ E DL+LVVG NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T+GAS P V+ VL +++E+ Sbjct: 196 NDICYATQNRQDAVRELARE-CDLVLVVGSPNSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVTAGASAPQVLVDGVLARLYEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_XYLF2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Xylella fastidiosa (strain M23) GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 182 NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 514 N IC ATQ RQDA+ ++ E DL+LVVG NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T+GAS P V+ VL +++E+ Sbjct: 196 NDICYATQNRQDAVRELARE-CDLVLVVGSPNSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVTAGASAPQVLVDGVLARLYEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CLOPS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens (strain SM101 / Type A) GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = -1 Query: 182 NEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 535 ++ ++FNTIC AT RQ ++ ++ +E DL+ V+GG NSSNT+ L EI + SY I++ K + L+ E V+ TIGIT+GASTPD + +V+ K+ E+ Sbjct: 182 SKEIVAFNTICSATDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDE------SLLEDESVK----------TIGITAGASTPDWIINEVISKIKEL 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBCH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio cholerae GN=ispH PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ +++ E+VD+++VVG NSSN++ L+E+AE G P Y ID + I P W Q+ IG+T+GAS P++ V +L ++ E+ Sbjct: 198 ICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAGASAPEELVNQILDRIKEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PSYIN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Psychromonas ingrahamii (strain 37) GN=ispH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.276e-12 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ K + E+ DL+LVVG NSSN++ LQE A G+ +Y IDSEK I K WL ++ +G+T+GAS P+ V++V+ ++ Sbjct: 196 ICYATQNRQDAV-KALAERSDLVLVVGSTNSSNSNRLQEKASCVGVNAYLIDSEKDI-----------------KTEWLENVKV-VGVTAGASAPEVLVKEVIARL 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBVY (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio vulnificus (strain YJ016) GN=ispH PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ ++ ++ VD+++VVG NSSN++ L+E+AE G P+Y D + I P W G++ +G+T+GAS P++ V +L ++ E+ Sbjct: 198 ICYATQNRQDAVRELAKD-VDVVVVVGSKNSSNSTRLKELAEKLGTPAYLTDCPQDIEP-----------------QWF-DGKVKVGVTAGASAPEELVNQILTRIKEL 287 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |