DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBVU (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio vulnificus GN=ispH PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ ++ ++ VD+++VVG NSSN++ L+E+AE G P+Y D + I P W G++ +G+T+GAS P++ V +L ++ E+ Sbjct: 198 ICYATQNRQDAVRELAKD-VDVVVVVGSKNSSNSTRLKELAEKLGTPAYLTDCPQDIEP-----------------QWF-DGKVKVGVTAGASAPEELVNQILTRIKEL 287
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CHRSD (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ispH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = -1 Query: 155 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 508 IC ATQ RQDA+ + E DL+LVVG NSSN++ L+E+AE G P+Y ID+ ++I P WL IGIT+GAS P+ V+ V++++ + E +LA Sbjct: 197 ICYATQNRQDAVRGLASES-DLVLVVGSPNSSNSNRLRELAERTGTPAYLIDTAEQIRP-----------------EWLTDVS-AIGITAGASAPEVLVQAVIERLQSLGAEAPDELA 295
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH2_BURMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 OS=Burkholderia mallei GN=ispH2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K + + D+++VVG NSSN+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P+ + V+ ++ E+ Sbjct: 208 ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASAPEVLAQAVIARLREL 297
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH1_BURPS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Burkholderia pseudomallei GN=ispH1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K + + D+++VVG NSSN+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P+ + V+ ++ E+ Sbjct: 208 ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASAPEVLAQAVIARLREL 297
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH1_RHOPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Rhodopseudomonas palustris GN=ispH1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQ A+ +M + VDLILVVG NSSN++ L+EI + GIPSY I + P WL G+ +GIT+GAS P+ V+DV++ + I Sbjct: 191 ICYATQNRQSAVRQM-SKLVDLILVVGANNSSNSNRLREIGTEAGIPSYLIADGSELDPA-----------------WL-DGKKAVGITAGASAPEVLVDDVIEALRRI 280
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_MANSM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=ispH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = -1 Query: 137 NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA*TEVQT 514 N IC AT RQ A+ ++ E+ DL++VVG NSSN++ L E+A G+P+ ID I P +WL KG TIG+T+GAS P+ V+ V+ ++ E+ + +L E T Sbjct: 194 NDICYATTNRQQAVRELAEQS-DLVIVVGSKNSSNSNRLAELASRMGVPAKLIDDSNDIEP-----------------DWL-KGINTIGVTAGASAPEVLVQSVIARLKELGVDSVEELEGCEENT 300
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_AZOSB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Azoarcus sp. (strain BH72) GN=ispH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ K + D++ VVG NSSN++ L+E+AE RG+P+Y +D+ I P W+ G+ IG+T+GAS P+ V +V++++ Sbjct: 196 ICYATQNRQDAV-KFMTPHADVVFVVGSKNSSNSNRLREVAELRGVPAYLVDNAAGIDPA-----------------WI-VGKRRIGVTAGASAPEVLVAEVIERL 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_RALSO (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Ralstonia solanacearum GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 36/106 (33.96%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ K + +V++++VVG NSSN++ L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P++ + ++ ++ Sbjct: 209 ICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAPEELAQSIVDRL 295
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_THISH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = -1 Query: 197 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLK 508 IC ATQ RQDA+ ++ E DL LVVG NSSN++ L+EIAE G+ +Y +D+ +I ++ WL +G+ +G+T+GAS P+ V++V++ Sbjct: 197 ICYATQNRQDAVKQLASE-CDLFLVVGSPNSSNSNRLREIAEKLGVEAYLVDNAGQI-----------------EDRWL-EGKTRVGVTAGASAPELLVQEVVE 281
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio parahaemolyticus GN=ispH PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ ++ + VD+++VVG NSSN++ L+E+AE G P Y D + I P W +G+ +G+T+GAS P++ V +L+++ E+ Sbjct: 198 ICYATQNRQDAVRELAGD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKTKVGVTAGASAPEELVNQILERIKEL 287 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |