DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBF1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ispH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL + Q +G+T+GAS P++ V ++++V Sbjct: 196 ICYATQNRQDAVRDMASQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEDL-----------------KEEWLTE-QTKVGVTAGASAPEELVNQIIEQV 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CLOAB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 185 VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 547 V+N ISFNTIC+AT ERQ + K + KVD ++V+GG SSNT+ L EI + + +++ I EN L IG+T+GASTPD +E+ + K+ E Sbjct: 179 VKNRAIEVISFNTICNATSERQK-IAKDLSNKVDFMVVIGGKQSSNTTKLYEICKSNCNETIHVENSGEI-----------------PENILKNKNCVIGVTAGASTPDWIIEEAISKMSE 281
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_AZOSE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Azoarcus sp. (strain EbN1) GN=ispH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 182 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 508 IC ATQ RQDA+ K + +VD++ VVG NSSN++ L+E+AE G+P+Y +D+ + I P WL + + +G+T+GAS P+ V+ V++++ E+ Sbjct: 196 ICYATQNRQDAV-KFMAPRVDVVFVVGSRNSSNSNRLREVAELLGVPAYLVDNAEGIEP-----------------IWL-EDKKRVGVTAGASAPEVLVDAVVERLKEL 285
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_TREDE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Treponema denticola GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 185 FNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 517 FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT L + A D P++ I+ I P +Y + IG+T+GASTPD +++V KK+ E Sbjct: 198 FNTICPATSDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPAWLIEDASEI-PKEIFSYSV------------------IGLTAGASTPDFIIDEVEKKLLE 288
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SODGM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Sodalis glossinidius (strain morsitans) GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1 Query: 158 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 508 IC AT RQ+A+ + + D++LVVG NSSN++ L E+A+ G P+Y IDS I +E+WL +G TIG+T+GAS PD V+ V++++ + E A +L Sbjct: 196 ICYATTNRQEAVRSLAAD-ADVVLVVGSKNSSNSNRLSELAQRVGKPAYLIDSAGDI-----------------QESWL-QGTQTIGVTAGASAPDILVQQVIERLRLLGAEGAKEL 293
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_PROMH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Proteus mirabilis (strain HI4320) GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = -1 Query: 155 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 508 IC AT RQ+A ++ E + D++ VVG NSSN++ L E+A+ G PSY IDS + I E W+ I +G+T+GAS PD V+ VL ++ EE ++L+ Sbjct: 197 ICYATTNRQEAARELAE-RADVVFVVGSKNSSNSNRLAELAQRAGKPSYLIDSAEDI-----------------DEIWVSHANI-VGVTAGASAPDILVQQVLARLKAFGAEEVIELS 295
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_NITEU (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nitrosomonas europaea GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 41/116 (35.34%), Postives = 69/116 (59.48%), Query Frame = -1 Query: 161 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 508 IC ATQ RQDA+ K+V+ DL++VVG NSSN++ L E+A + + +Y +D +++ +E+WL + IGIT+GAS P+ V+ VL+++ +I +++ Q Sbjct: 197 ICYATQNRQDAVKKLVK-LCDLVVVVGSPNSSNSNRLCEVARNENVEAYMVDQAEQL-----------------QESWLTNKR-CIGITAGASAPEILVQQVLERLEQIAAKQSNQ 293
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_HAHCH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Hahella chejuensis (strain KCTC 2396) GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = -1 Query: 155 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 508 IC ATQ RQDA+ K + D++LVVG NSSN++ L+E+AE P+Y ID I P +W G ++G+T+GAS P+ V+ V++++ E+ E ++A Sbjct: 197 ICYATQNRQDAV-KELAATCDVVLVVGSVNSSNSNRLRELAERMQTPAYLIDGAHEIQP-----------------DWF-AGAASVGVTAGASAPEVLVQQVVQRLRELGGEAPAEIA 295
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_ALISL (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=ispH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL Q +G+T+GAS P++ V ++++V Sbjct: 196 ICYATQNRQDAVRDMAGQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEEL-----------------KEEWL-TNQAKVGVTAGASAPEELVNQIIEQV 282
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_VIBFM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio fischeri (strain MJ11) GN=ispH PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 191 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 508 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL Q +G+T+GAS P++ V ++++V Sbjct: 196 ICYATQNRQDAVRDMASQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEDL-----------------KEEWL-TDQAKVGVTAGASAPEELVNQIIEQV 282 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |