DN617802

Overview
NameDN617802
Unique NameDN617802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IRQMTNAASSYMADYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 384          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 383          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT08_SOLTU (Patatin-08 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A + +KWG  +W+       I  +    SS + D+++S +FQ+  S+ NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTTSEFDKTYTAEETAKWGAIQWMLV-----IQRMTDAASSYMTDYYLSTVFQAQNSQKNYLRVQENALTGTTTEMDDASEANMESLVQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 384          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21
Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  241 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 371          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLRANK 383          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT14_SOLTU (Patatin-14 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = -2
Query:  164 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR  +
Sbjct:  254 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLRANK 384          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT10_SOLTU (Patatin-10 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLRANK 383          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLRANK 383          
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.893e-20
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = -2
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A + +KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  241 MLLLSLGTGTNSEFDKTYTAQETAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 371          
The following BLAST results are available for this feature:
BLAST of DN617802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT12_SOLTU6.506e-2140.82Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]
PAT0_SOLTU6.506e-2140.82Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PAT08_SOLTU6.506e-2140.82Patatin-08 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K1_SOLTU8.498e-2140.82Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PATB1_SOLTU8.498e-2140.82Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]
PAT14_SOLTU8.498e-2141.67Patatin-14 OS=Solanum tuberosum PE=2 SV=1[more]
PATJ1_SOLTU1.110e-2040.82Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT10_SOLTU1.110e-2040.82Patatin-10 OS=Solanum tuberosum PE=2 SV=1[more]
PAT06_SOLTU1.110e-2040.82Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K4_SOLTU1.893e-2040.14Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617802 ID=DN617802; Name=DN617802; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTATTTTAATAGTAATAATCTTATTAATTCGTAGA
GTCCAATTGGAAGCACTTTGTATCGGATTGATTACACATAAAAACATGCA
TGCGGAATCCTTATGCCTTACTCAAATAAAACGAGTTTCAAATTAAAAGA
CTTATTGGCGGCAGCGGAGCTTAAGTTGTTCAGAGAGTAATTTGGCAAAG
TGAGCAAGTGCTTCTTCATTTGTGACCTCTCCGTCGACCTTCTCATATCT
GCCAGTCTCCAGGTTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTC
CAGTTTCCACAAGCCTTTGCATATTCTCCTCCGTGGCAATGTCAACAGAT
GCTGCATCACCAGTCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTT
GCTTCCGCAGGATTGAAAGAGAGCAGACACATGGAAATCAACAATATCGG
AGCTTCCATCAGAGTAGATGTCGAGTATTGGGGTATTGCTATCTTCATAG
ATCCATTCGAAAATGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAA
TTCTTTCTTGGCTGTACCTGTGCCTAGTGATAGTACCAGCATA
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