DN617802

Overview
NameDN617802
Unique NameDN617802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PATB2_SOLTU (Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.472e-20
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ L G    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 383
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.472e-20
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ L G    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 384
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.472e-20
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ L G    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR  +
Sbjct:  253 MLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLRANK 383
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PT1K2_SOLTU (Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  242 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 372
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PATA3_SOLTU (Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 384
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PATA2_SOLTU (Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 384
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT02_SOLTU (Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 384
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT01_SOLTU (Patatin-01 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  254 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 384
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.194e-20
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  253 MLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENPLTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLRANK 383
[Close]
BLAST of DN617802 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = -2 
Query:  155 MLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLRCRQ 592
            ML+LSLGTGT  + +  Y A +A+ W    W+       I  +    SS + D+++S  FQ+  SK+NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS  N E           T EEAL  FAKLLS++ KLR  +
Sbjct:  253 MLLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLV-----IQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPE-----------TYEEALKRFAKLLSDRKKLRANK 383
The following BLAST results are available for this feature:
BLAST of DN617802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PATB2_SOLTU2.472e-2040.14Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1[more]
PAT11_SOLTU2.472e-2040.14Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT04_SOLTU2.472e-2040.14Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PT1K2_SOLTU5.508e-2039.46Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 ... [more]
PATA3_SOLTU5.508e-2039.46Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1[more]
PATA2_SOLTU5.508e-2039.46Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1[more]
PAT02_SOLTU5.508e-2039.46Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 P... [more]
PAT01_SOLTU5.508e-2039.46Patatin-01 OS=Solanum tuberosum PE=2 SV=1[more]
PAT16_SOLTU7.194e-2039.46Patatin-16 OS=Solanum tuberosum PE=2 SV=1[more]
PAT17_SOLCD9.395e-2040.82Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617802 ID=DN617802; Name=DN617802; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTATTTTAATAGTAATAATCTTATTAATTCGTAGA
GTCCAATTGGAAGCACTTTGTATCGGATTGATTACACATAAAAACATGCA
TGCGGAATCCTTATGCCTTACTCAAATAAAACGAGTTTCAAATTAAAAGA
CTTATTGGCGGCAGCGGAGCTTAAGTTGTTCAGAGAGTAATTTGGCAAAG
TGAGCAAGTGCTTCTTCATTTGTGACCTCTCCGTCGACCTTCTCATATCT
GCCAGTCTCCAGGTTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTC
CAGTTTCCACAAGCCTTTGCATATTCTCCTCCGTGGCAATGTCAACAGAT
GCTGCATCACCAGTCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTT
GCTTCCGCAGGATTGAAAGAGAGCAGACACATGGAAATCAACAATATCGG
AGCTTCCATCAGAGTAGATGTCGAGTATTGGGGTATTGCTATCTTCATAG
ATCCATTCGAAAATGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAA
TTCTTTCTTGGCTGTACCTGTGCCTAGTGATAGTACCAGCATA
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