DN617799

Overview
NameDN617799
Unique NameDN617799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617799 vs. ExPASy Swiss-Prot
Match: ERG7_YEAST (Lanosterol synthase OS=Saccharomyces cerevisiae GN=ERG7 PE=1 SV=4)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 2 
Query:  347 SYHSTLQAHD-GHWPGDYGGPMFLMPGLVITLSITGALNAVLLEEHKK-EMCRYIYNHQNR-DGGWGLHIEGPSTMFGSVLNYVTLRLLG 607
            S+   LQ  D G +P  Y GPMF+  G V    I G    + + EH++ E+ RYI N  +  DGGWGLH    ST+FG+VLNYV LRLLG
Sbjct:   82 SFFKLLQEPDSGIFPCQYKGPMFMTIGYVAVNYIAG----IEIPEHERIELIRYIVNTAHPVDGGWGLHSVDKSTVFGTVLNYVILRLLG 167
The following BLAST results are available for this feature:
BLAST of DN617799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ERG7_YEAST4.415e-1147.78Lanosterol synthase OS=Saccharomyces cerevisiae GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617799 ID=DN617799; Name=DN617799; organism=Citrus sinensis; type=EST; length=662bp
GTCCACTCTCTTTTCTCCTTCCGTTAATCAGTTAGAAGAAGATATGTGGA
AGCTGAAGATCGCCGAGGGCGGCAATGCATGGCTGCGTACATTGAACAAT
CACGTCGGTAGACAAGTATGGGAGTTCGATCCGGAGCTCGGATCGCCGGA
GGAGCTGGCGAAGATCGAAAAGGCTCGTGAAAATTTCCATAACCATCGCT
TCGAGAAGAAGCACAGTGCCGATCTGCTCATGCGATTGCAGTTTGCCAAG
GAGAATCCAGGTGTTAGAGTTTTACCTCAAGTCAAAGTGAAAGACACAGA
AGATGTTACTGAGGATATAGTGACTAACACATTGAGAAGGGCATTAAGTT
ACCATTCAACTCTCCAGGCCCATGATGGGCACTGGCCAGGGGATTATGGA
GGTCCTATGTTTCTAATGCCTGGCTTGGTCATTACTTTGTCTATTACTGG
AGCACTGAATGCTGTTCTATTGGAAGAACATAAGAAGGAGATGTGTCGTT
ATATCTACAATCACCAGAACAGAGACGGTGGATGGGGTTTACATATTGAG
GGCCCAAGTACCATGTTTGGTTCAGTCTTGAACTATGTCACTCTAAGGTT
GCTTGGTGAAGGGGCTAATGATGGGCGAGGGGCTAATGATGGGCGAGGGG
CAATGGAGAGAG
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