DN617798

Overview
NameDN617798
Unique NameDN617798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: BARS1_ARATH (Baruol synthase OS=Arabidopsis thaliana GN=BARS1 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.058e-40
Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F YGT+F V+GLVAAG  Y+N   IR+A  F+L  Q   GGWGESYLSC +K Y  L G++++VVNT  A++ LI   Q + DP P+HRAA+ LINSQM+NGD+PQ+EIMGVF  N M+ +  YRN+F +WAL  Y
Sbjct:  617 FIYGTFFAVRGLVAAGKCYNNCEAIRRAVRFILDTQNTEGGWGESYLSCPRKKYIPLIGNKTNVVNTGQALMVLIMGNQMKRDPLPVHRAAKVLINSQMDNGDFPQQEIMGVFKMNVMLHFPTYRNMFTLWALTHY 752          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN1_ARATH (Arabidiol synthase OS=Arabidopsis thaliana GN=PEN1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F YGT F V+GLVAAG  + N   IR+A  FLL  Q   GGWGESYLSC +K Y+ L G+++++V+T  A++ LI  GQ E DP P+HRAA+ +IN Q++NGD+PQ+E+MGVFN N ++ Y  YRNI+ +WAL  Y
Sbjct:  622 FIYGTLFAVRGLVAAGKTFHNCEPIRRAVRFLLDTQNQEGGWGESYLSCLRKKYTPLAGNKTNIVSTGQALMVLIMGGQMERDPLPVHRAAKVVINLQLDNGDFPQQEVMGVFNMNVLLHYPTYRNIYSLWALTLY 757          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN3_ARATH (Probable pentacyclic triterpene synthase 3 OS=Arabidopsis thaliana GN=PEN3 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F YGT+F V+GLVAAG  Y N   IR+A  FLL  Q   GGWGES+LSC  K Y  LEG+++ VVNT  A++ LI  GQ + DP P+HRAA+ LINSQM+NGD+PQ+EI GV+  N M+++  +RN F +WAL  Y
Sbjct:  617 FIYGTFFAVRGLVAAGNTYDNCEAIRRAVRFLLDIQNGEGGWGESFLSCPNKNYIPLEGNKTDVVNTGQALMVLIMGGQMDRDPLPVHRAAKVLINSQMDNGDFPQQEIRGVYKMNVMLNFPTFRNSFTLWALTHY 752          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN5_ARATH (Marneral synthase OS=Arabidopsis thaliana GN=MRN1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35
Identity = 70/136 (51.47%), Postives = 95/136 (69.85%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYGT F V+GL AAG  + NS  IR+A +F+L+ Q   GGWGES LSC  K Y   +G+ ++VVNT  AM+ L+  GQ E DP+P+HRAA+ LINSQ++ GD+PQ+E  G++  N ++ Y  YRN+F +WAL  Y
Sbjct:  618 FTYGTLFAVRGLAAAGKTFGNSEAIRRAVQFILNTQNAEGGWGESALSCPNKKYIPSKGNVTNVVNTGQAMMVLLIGGQMERDPSPVHRAAKVLINSQLDIGDFPQQERRGIY-MNMLLHYPTYRNMFSLWALALY 752          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: CAS1_DICDI (Cycloartenol synthase OS=Dictyostelium discoideum GN=cas1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35
Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYGTWFG++GLVA+G   ++ S + KAC+FL SKQR  GGWGES+ S   K Y  ++ + S VVNT WA+L+L+ A   + +   + R  ++LI  Q  NGD+PQE I+GVFN NCMISYS Y+NIFP+WAL  Y
Sbjct:  564 FTYGTWFGIEGLVASGEPLTSPSIV-KACKFLASKQRADGGWGESFKSNVTKEY--VQHETSQVVNTGWALLSLMSAKYPDREC--IERGIKFLIQRQYPNGDFPQESIIGVFNFNCMISYSNYKNIFPLWALSRY 694          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_HUMAN (Lanosterol synthase OS=Homo sapiens GN=LSS PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.228e-32
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSST---IRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYGTWFG++     G  Y + +    + +AC+FLLS+Q   GGWGE + SC+++ Y  L+  +S + NT WAM+ L+     + +     R  R L+  Q+ NGD+PQE I GVFN++C ISY++YRNIFPIWALG +
Sbjct:  585 FTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRY--LQSAQSQIHNTCWAMMGLMAVRHPDIEAQ--ERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRF 719          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_BOVIN (Lanosterol synthase OS=Bos taurus GN=LSS PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31
Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNS---STIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYG WFG++     G  Y N    + I +AC+FLLS+Q   GGWGE + SC+++ Y  ++  +S + NT WA++ L+       D   L R   YL+  Q+ NGD+PQE I GVFN++C ISY++YRN+FPIW LG +
Sbjct:  585 FTYGAWFGLEAFACMGHTYHNGVACAEISRACDFLLSRQMADGGWGEDFESCKQRRY--VQSAQSQIHNTCWALMGLMAV--RHPDVAALERGVSYLLEKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPIWTLGRF 719          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_MOUSE (Lanosterol synthase OS=Mus musculus GN=Lss PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.389e-31
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSST---IRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYGTWFG++     G  Y + +    + +AC FLLS+Q   GGWGE + SC+++ Y  ++  RS V +T WA++ L+       D T   R  R L+  Q+ NGD+PQE I GVFN++C ISY++YRNIFPIWALG +
Sbjct:  586 FTYGTWFGLEAFACMGHTYQDGAACAEVAQACNFLLSQQMADGGWGEDFESCEQRRY--VQSARSQVHSTCWALMGLMAV--RHPDITAQERGIRCLLGKQLPNGDWPQENISGVFNKSCAISYTSYRNIFPIWALGRF 720          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_RAT (Lanosterol synthase OS=Rattus norvegicus GN=Lss PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.682e-30
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSST---IRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            FTYGTWFG++     G  Y N +    + +AC FLLS+Q   GGWGE + SC+++ Y    G + H  +T WA+L L+       D +   R  R L+  Q+ NGD+PQE I GVFN++C ISY+ YRNIFPIWALG +
Sbjct:  586 FTYGTWFGLEAFACMGHIYQNRTACAEVAQACHFLLSRQMADGGWGEDFESCEQRRYVQSAGSQVH--STCWALLGLMAV--RHPDISAQERGIRCLLGKQLPNGDWPQENISGVFNKSCAISYTNYRNIFPIWALGRF 720          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_CANAL (Lanosterol synthase OS=Candida albicans GN=ERG7 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.128e-26
Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = -3
Query:  210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYR 620
            +TY + F ++ L   G++Y +SS ++K C+FL+SKQ P GGW ES   C+   Y N  G+ S VV +AWA++ LI       D  P+ R  ++L+  Q+  G++  E+I GVFN +C I Y +YR +FPI ALG Y+
Sbjct:  587 YTYASMFALEALHTVGLDYESSSAVKKGCDFLISKQLPDGGWSESMKGCETHSYVN--GENSLVVQSAWALIGLILGNY--PDEEPIKRGIQFLMKRQLPTGEWKYEDIEGVFNHSCAIEYPSYRFLFPIKALGLYK 719          
The following BLAST results are available for this feature:
BLAST of DN617798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
BARS1_ARATH3.058e-4055.88Baruol synthase OS=Arabidopsis thaliana GN=BARS1 P... [more]
PEN1_ARATH1.518e-3953.68Arabidiol synthase OS=Arabidopsis thaliana GN=PEN1... [more]
PEN3_ARATH2.589e-3955.15Probable pentacyclic triterpene synthase 3 OS=Arab... [more]
PEN5_ARATH1.736e-3551.47Marneral synthase OS=Arabidopsis thaliana GN=MRN1 ... [more]
CAS1_DICDI6.598e-3553.68Cycloartenol synthase OS=Dictyostelium discoideum ... [more]
ERG7_HUMAN5.228e-3245.32Lanosterol synthase OS=Homo sapiens GN=LSS PE=1 SV... [more]
ERG7_BOVIN1.521e-3144.60Lanosterol synthase OS=Bos taurus GN=LSS PE=1 SV=2[more]
ERG7_MOUSE3.389e-3146.04Lanosterol synthase OS=Mus musculus GN=Lss PE=2 SV... [more]
ERG7_RAT1.682e-3046.04Lanosterol synthase OS=Rattus norvegicus GN=Lss PE... [more]
ERG7_CANAL1.128e-2641.61Lanosterol synthase OS=Candida albicans GN=ERG7 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617798 ID=DN617798; Name=DN617798; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTGAGCTAAGAGTCTTTTCTTACCTTATTCTGCTT
TCGTTTTTGTTTTTGCTGGAAACTTTGTACATCTCATTACAGCATTGAAA
GCGATAAGGAAACAAAAAAGTTGAATGGACTAGTAGAAATTGGAAAGCAT
ATGGACGATTGTAATCGAAATGGTTAAAAAGTTTACATATGAGCCTCCAA
TACTCGACATCGGTACTCTCCAAGTGCCCAAATAGGGAAAATGTTTCTAT
ATGCAGAGTAGCTGATCATACAATTCCTATTGAAGACTCCCATAATTTCC
TCCTGTGGATAATCTCCATTCTCCATTTGCGAATTTATTAAATATCTAGC
AGCACGGTGCAAAGGTGTCGGATCTGTCTCAGCCTGTCCAGCATCAATCA
GAGCCAACATAGCCCATGCTGTATTTACCACATGAGACCTATCCCCTTCA
AGATTTGAATAAACCTTTTTTTGACATGAAAGATAACTTTCTCCCCAGCC
ACCTGAAGGACGCTGTTTTGACAGCAGAAACTCACAAGCTTTACGGATGG
TAGAAGAATTGCTGTAGTTCATTCCAGCAGCCACCAAACCTTTCACCCCA
AACCATGTACCGTAAGTGAAGC
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