DN617798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_YEAST (Lanosterol synthase OS=Saccharomyces cerevisiae GN=ERG7 PE=1 SV=4) HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25 Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = -3 Query: 189 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCRVLEAH 620 FTY F ++ L G Y NSST+RK C+FL+SKQ GGWGES S +++S ++ ++S VV TAWA++AL+ A + + R L N Q E+G++ E + GVFN +C I Y +YR +FPI ALG Y R E H Sbjct: 591 FTYAGMFALEALHTVGETYENSSTVRKGCDFLVSKQMKDGGWGESMKS--SELHSYVDSEKSLVVQTAWALIALLFAEYPNKE--VIDRGIDLLKNRQEESGEWKFESVEGVFNHSCAIEYPSYRFLFPIKALGMY-SRAYETH 729
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_SCHPO (Lanosterol synthase OS=Schizosaccharomyces pombe GN=erg7 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25 Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620 FTY F L +AG Y N +KACEFLLSKQRP GGW ESY++C VY+ E + S V T WA+ ALI+A D P+ + ++L+ SQ +G + Q+ + G+FN+N I+Y Y+ F I+ LG++ Sbjct: 580 FTYAAMFATGSLASAGRYYENCPVQKKACEFLLSKQRPDGGWSESYMACVTGVYT--ETESSLVTQTGWALDALINA--KYPDRKPIEKGIKFLMASQKSDGSWQQKSMEGIFNKNVAIAYPNYKLYFSIYTLGKF 711
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: ERG7_PNECA (Lanosterol synthase OS=Pneumocystis carinii GN=ERG7 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.240e-24 Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = -3 Query: 204 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCR 620 FTY T F ++ L Y NS R+AC+FL++KQ GGW E Y SC +++ S VV TAWA + L+ A D TP+ R +++ Q NG++ QE I GVFN+NCMISY Y+ F I ALG Y R Sbjct: 580 FTYATMFALESLSCVKDFYENSFHSRRACDFLVNKQEEDGGWSEGYQSCTDGIWTR-HPTGSQVVQTAWACIGLMYANYP--DETPIKRGINLIMSRQQPNGEWKQEAIEGVFNKNCMISYPNYKFNFTIKALGMYSKR 715
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: SQHC_RHISN (Probable squalene--hopene cyclase OS=Rhizobium sp. (strain NGR234) GN=shc PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 54/138 (39.13%), Postives = 74/138 (53.62%), Query Frame = -3 Query: 210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGV-FNRNCMISYSAYRNIFPIWALGEYR 620 + YGTW + L AAG+++ + IRKA E+L+S Q GGWGE +S + YS E S TAWA+L L+ AG E + + R YL N+Q ENG + ++ F R + Y Y FP+WAL YR Sbjct: 507 YIYGTWSVLCALNAAGIDHQDPM-IRKAVEWLVSIQSWDGGWGEDAIS-YRLDYSGYEQAPSTSSQTAWALLGLMAAG--EVEHPAVARGVNYLKNAQTENGLWDEQRYTATGFPRVFYLRYHGYSKFFPLWALARYR 640
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: SQHC_BRAJA (Squalene--hopene cyclase OS=Bradyrhizobium japonicum GN=shc PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16 Identity = 53/138 (38.41%), Postives = 70/138 (50.72%), Query Frame = -3 Query: 210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGV-FNRNCMISYSAYRNIFPIWALGEYR 620 F YGTW + L AG+ + + IRKA ++L S Q GGWGE +S + Y E S TAWA+LAL+ AG E D + R YLI +Q E G + ++ F R + Y Y FP+WAL YR Sbjct: 513 FIYGTWSVLCALNMAGVRHDDPM-IRKAADWLASIQNKDGGWGEDAVS-YRLDYKGWEAAPSTASQTAWALLALMAAG--EVDHPAVARGVEYLIATQNEKGLWDEQRYTATGFPRVFYLRYHGYSKFFPLWALARYR 646
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: SQHC_ALIAD (Squalene--hopene cyclase OS=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) GN=shc PE=1 SV=4) HSP 1 Score: 76.2554 bits (186), Expect = 1.430e-13 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = -3 Query: 210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGV-FNRNCMISYSAYRNIFPIWALGEYR 620 + YGT V L A G++ + I+KA +++ Q P GGWGE S + Y+ S TAWA++ALI G+AE++ R +YL+ +Q +G + + G F + + Y+ YR++FP ALG Y+ Sbjct: 493 YLYGTGAVVSALKAVGID-TREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAG--KGASTPSQTAWALMALIAGGRAESEAA--RRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYK 625
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: SQHC_ZYMMO (Squalene--hopene cyclase OS=Zymomonas mobilis GN=shc PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11 Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = -3 Query: 210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGV-FNRNCMISYSAYRNIFPIWALGEYR 620 + YGTW + L A + + + + I+KA +L + Q GGWGE+ S YS E S TAWA+L L+ G+A ++ + +L +Q E G + ++ G F R + Y Y FP+WAL YR Sbjct: 511 YIYGTWSALCALNVAALPHDHLA-IQKAVAWLKTIQNEDGGWGENCDSYALD-YSGYEPMDSTASQTAWALLGLMAVGEANSEAVT--KGINWLAQNQDEEGLWKEDYYSGGGFPRVFYLRYHGYSKYFPLWALARYR 644 The following BLAST results are available for this feature:
BLAST of DN617798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617798 ID=DN617798; Name=DN617798; organism=Citrus sinensis; type=EST; length=622bpback to top |