DN617793

Overview
NameDN617793
Unique NameDN617793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.861e-19
Identity = 52/157 (33.12%), Postives = 71/157 (45.22%), Query Frame = 3
Query:  141 ETLTLCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXXIIKFSSEKSLRSR-------PIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            E L LC + CGF G+  TNNMC KC+                              FSS  S  +        PI  + ++      G+ +E T      A    +  NRC  CR+KVGL GF CRCG  FC  HR++D+H C++D+K   R+ IA+
Sbjct:   76 EQLALCSSGCGFFGSKETNNMCSKCYRDHLKATSPL--------------------FSSSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAKP-NRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAK 211          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17
Identity = 35/50 (70.00%), Postives = 44/50 (88.00%), Query Frame = 3
Query:  441 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            VNRC+ CR++VGLTGFRCRCGELFC  HR+S+ H+CS+DYK+ GR+ IAR
Sbjct:  112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIAR 161          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.358e-17
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 3
Query:  420 ANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            A  E+   NRC+ CRRKVGLTGF+CRCG  FCG HRY+D H C +DYKS GR+ IA+
Sbjct:  167 ATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAK 223          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.796e-16
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  306 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKS 566
            K ++ K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C YDYK+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  306 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKS 566
            K ++ K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C YDYK+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  312 SSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            S +K++     +++  SD A      Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +
Sbjct:  109 SVDKAVPETEDVQASVSDTA------QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.367e-15
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  312 SSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            S +K++     +++  SD A      Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +
Sbjct:  109 SVDKAVPETEDLQASVSDTA------QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  390 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +
Sbjct:  129 QQASEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  390 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +
Sbjct:  144 QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 210          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  390 QELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            Q+ ++ + K     K+  NRC  CR+KVGLTGF CRCG ++CG HRYSD H+CSY+YK+   + I +
Sbjct:  144 QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 210          
The following BLAST results are available for this feature:
BLAST of DN617793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SAP12_ORYSJ7.861e-1933.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ3.303e-1770.00Zinc finger AN1 domain-containing stress-associate... [more]
SAP14_ORYSJ7.358e-1763.16Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN5_MOUSE2.796e-1645.98AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN4.769e-1645.98AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
ZFAN6_HUMAN1.812e-1540.86AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_PONAB2.367e-1540.86AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN3.091e-1549.25AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
ZFAN6_RAT5.273e-1549.25AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE5.273e-1549.25AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617793 ID=DN617793; Name=DN617793; organism=Citrus sinensis; type=EST; length=592bp
CCCCTCTCTCTCTAGAACTCTCACTTCTCTTCGATTTAATCCCCTCTGTC
TCTAAAGCTCTTAATTGGAGAAAAAAAAGAGAGTTTTTCTCAGAAATGGC
TCAGAAAACAGAAAAAGAAGAGACAGAGTTCAAGGTTCCTGAAACTTTGA
CTCTTTGCGTAAACAACTGTGGCTTCACCGGAAATCCAGCCACAAATAAT
ATGTGCCAGAAATGTTTCAACGCAACCGCTACCACCACCGCAAGCGCCGT
TGCTGGTTCGAGTACGGGCGGCGGCGGCGGCGGAGGAAGCGGTGTAGCGA
TCATAAAGTTTTCTAGCGAGAAATCTTTGAGATCTCGGCCTATCATCCGG
TCTGGGTCATCCGATGCTGCCGGTACGACCGGTCAAAATCAGGAGTTGAC
GGATCGGCGAGAGAAGGAAGCCAACGTAGAGAAACGAGTTGTGAATCGGT
GCTCCGGTTGTCGACGAAAGGTTGGATTGACCGGATTTAGATGTCGCTGC
GGGGAGCTGTTCTGCGGCGAACATCGGTACTCCGATCGTCACGATTGCAG
CTATGATTATAAATCGGGCGGTCGCGACGCCATCGCGAGAGA
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