DN617793

Overview
NameDN617793
Unique NameDN617793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14
Identity = 47/152 (30.92%), Postives = 60/152 (39.47%), Query Frame = 3
Query:  135 VPETLTL-CVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXXIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIA 587
            V ET  L C   CG  G    NN+C  C+                                 +  L+  P +R         T Q+Q            E     RC  C+RKVG+ GF+CRCG +FCG HRY + H C +DYK  GR A+A
Sbjct:    2 VNETEALPCEGGCGLYGTRVNNNLCSLCYK--------------------------------KSVLQHSPALRFEPE-----TEQSQCCPPTNSPAVEEEPVKKRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALA 116          
BLAST of DN617793 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14
Identity = 50/152 (32.89%), Postives = 66/152 (43.42%), Query Frame = 3
Query:  153 LCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXXIIKFSSEKSLR-----SRPIIRSGSS-DAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSGGRDAIAR 590
            +C   CGF G+ AT+ +C KC+                               S + SL+     S  +I+  S     GTT      T  + K         NRC  CR+KVGL GF CRCG +FCG H       C++DYK+ GR+AIAR
Sbjct:   17 MCAAGCGFFGSAATDGLCSKCYKQQQPQPRHLIGTAAGD--------------SDKTSLKVVADLSTLVIKDNSGVGGEGTTVMAPPATVTKAK---------NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIAR 139          
The following BLAST results are available for this feature:
BLAST of DN617793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SAP10_ARATH3.418e-1430.92Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP10_ORYSJ7.614e-1432.89Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617793 ID=DN617793; Name=DN617793; organism=Citrus sinensis; type=EST; length=592bp
CCCCTCTCTCTCTAGAACTCTCACTTCTCTTCGATTTAATCCCCTCTGTC
TCTAAAGCTCTTAATTGGAGAAAAAAAAGAGAGTTTTTCTCAGAAATGGC
TCAGAAAACAGAAAAAGAAGAGACAGAGTTCAAGGTTCCTGAAACTTTGA
CTCTTTGCGTAAACAACTGTGGCTTCACCGGAAATCCAGCCACAAATAAT
ATGTGCCAGAAATGTTTCAACGCAACCGCTACCACCACCGCAAGCGCCGT
TGCTGGTTCGAGTACGGGCGGCGGCGGCGGCGGAGGAAGCGGTGTAGCGA
TCATAAAGTTTTCTAGCGAGAAATCTTTGAGATCTCGGCCTATCATCCGG
TCTGGGTCATCCGATGCTGCCGGTACGACCGGTCAAAATCAGGAGTTGAC
GGATCGGCGAGAGAAGGAAGCCAACGTAGAGAAACGAGTTGTGAATCGGT
GCTCCGGTTGTCGACGAAAGGTTGGATTGACCGGATTTAGATGTCGCTGC
GGGGAGCTGTTCTGCGGCGAACATCGGTACTCCGATCGTCACGATTGCAG
CTATGATTATAAATCGGGCGGTCGCGACGCCATCGCGAGAGA
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