DN617779

Overview
NameDN617779
Unique NameDN617779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10459 contig Csv1_Contig10459:27..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 8.272e-83
Identity = 142/221 (64.25%), Postives = 162/221 (73.30%), Query Frame = 1
Query:   58 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            YG W +AHATFY              YGNLYS GYGTNTAALST LFN+G +CG+C+++ C ND QWCL GS+ VTATN CPP        GGWC+PP  HFD+++P F  I  YRAGIVPV YRRV C + GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF V  S+G +V S +V P  W FGQT+
Sbjct:   26 YGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTF 246          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.843e-82
Identity = 143/221 (64.71%), Postives = 168/221 (76.02%), Query Frame = 1
Query:   61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            GGW   HATFY              YGNL+SQGYG  TAALSTALFN+G  CGACF++ C +DP+WC+ GSIIV+ATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C++ GGIRFTING+ YF+LVLITNV GAGD+ AVS+KGS+T +WQ MSRNWGQNWQSN+YL GQSLSF VT S+G +VVSY V P +W FGQT+
Sbjct:   30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTF 250          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81
Identity = 146/227 (64.32%), Postives = 169/227 (74.45%), Query Frame = 1
Query:   55 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC---ANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            G GGW +AHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF++ C         CL GS++VTATNFCPP        GGWC+PP  HFD+SQPVFQ IA ++AGIVPV YRRV C++ GGIRFTINGHSYFNLVL+TNV GAGDVHAV++K  R+  WQ +SRNWGQNWQS + L+GQ+LSF VTT +G SVVS +  P  WSFGQT++
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFS 286          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.560e-81
Identity = 147/247 (59.51%), Postives = 173/247 (70.04%), Query Frame = 1
Query:    4 LWVILCVGFL-----SLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            LW+ +   FL     + +  V   G W NAHATFY              YGNLYSQGYG NTAALSTALFNNG SCGACF+I C +DP+WC+ G  SI+VTATNFCPP        GGWC+PP  HFDL+ P+F  I  YRAGIVPV YRRV C++ GGIRFT+NG  YFNLVL+TNV GAGD++ VS+KGS+T W  MSRNWGQNWQSN+ L GQSLSF VT S+  S  S++VAP  W FGQT++
Sbjct:   10 LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFS 256          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.928e-81
Identity = 140/222 (63.06%), Postives = 165/222 (74.32%), Query Frame = 1
Query:   61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            G W  AHATFY              YGNLYSQGYGTNTAALST+LFN+G SCGACF+I C NDP+WC  G  S+ VTATNFCPP        GGWC+PP  HFDL+ PVF  IA+YRAGIVP+ YRRV C+++GGIRFTINGH YFNLVLITNV GAGD+   S+KGS+T W  ++RNWGQNWQSN+ L GQSLSF VT+S+  +  S+++AP NW FGQT+
Sbjct:   32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTF 253          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.554e-80
Identity = 140/229 (61.14%), Postives = 165/229 (72.05%), Query Frame = 1
Query:   40 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +  V   GGW  AHATFY              YGNLYSQGYG NTAALSTALFNNG SCGACF++ CA+DP+WC  GS  I +TATNFCPP        GGWC+PP  HFDL+ P+F  IA+YRAGIVPV +RRV C++ GGIRFTING  YFNLVL+TNV GAG++  + +KG+ T W  MSRNWGQNWQSNS L GQSLSF VT+S+  S  S+++AP NW FGQT+
Sbjct:   22 IPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTF 250          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.045e-77
Identity = 139/231 (60.17%), Postives = 162/231 (70.13%), Query Frame = 1
Query:   40 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDP--QWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            +    G G W +AHATFY              YGNLYSQGYG N AALSTALFN+G SCGACF+I C N P  +WC  GS  I++TATNFCPP        GGWC+PP  HFDL+ P+F HIA+YRAGIVPV YRRV C++ GG+RFTING  YFNLVLITNV GAGD+   S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF VT S+  +  S++ AP  W FGQT+
Sbjct:   27 IPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTF 257          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.291e-75
Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 1
Query:    4 LWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN----DPQWCLRG----SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIK---GSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            L V+L +      SS    G W +AHATFY              YGN Y QGYGT+TAALS  +F +GLSCGACF++ C      D + CL      SI+VTAT+ CP         GGWC+PP HHFDLSQP F  IA++++GIVPV YRRV C+R GG+RFTINGHSYFNLVL++NV GAGDVHAV++K   G + RWQ M+RNWGQNWQS + L+GQ+LSF VTT +  SVVSY+VAP  W+FGQT+T
Sbjct:    9 LLVLLSLSSSLSSSSAAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFT 259          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.083e-74
Identity = 136/240 (56.67%), Postives = 163/240 (67.92%), Query Frame = 1
Query:    4 LWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            L  +  V  ++   +  G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCGACF++ C      CL G++ VTATN CPP        GGWC+PP  HFD+++P F  IAQ RAG+VPV YRRV C + GGIRFTI GHSYFNLVL+TNV GAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LSF VT S+G +V S +VAP  WSFGQT++
Sbjct:    6 LLAVAAVAAMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFS 244          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.412e-74
Identity = 134/231 (58.01%), Postives = 164/231 (71.00%), Query Frame = 1
Query:   55 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQW-CLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT------RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            G G W   HATFY              YGNLYSQGYGT+TAALSTALFN GLSCG+C+++ CA D +  CL G  ++ VTATNFCPP        GGWC+PP  HFDL++P F  IA++ AGIVPV +RRV C R GG+RFT+NGH+YFNLVL+TNV GAGDV ++++KGS +      RWQPMSRNWGQNWQSN+YL+G++LSF VT  +G S+    VAP  W FGQT+
Sbjct:   24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTF 254          
The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
EXPA2_ORYSJ8.272e-8364.25Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA2_ARATH1.843e-8264.71Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA5_ORYSJ1.194e-8164.32Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ARATH1.560e-8159.51Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXP16_ARATH5.928e-8163.06Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA6_ARATH6.554e-8061.14Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA7_ORYSJ3.045e-7760.17Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ8.291e-7555.78Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ORYSJ1.083e-7456.67Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA6_ORYSJ2.412e-7458.01Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bp
GCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCATTGGTCTCATCCGT
TCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTTCTATGGAGGTG
GTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACGGCAATTTGTAC
AGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCACTGCTTTGTTCAA
CAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTGCGCTAATGACC
CGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCACTAACTTTTGC
CCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTTGATCTCTCTCA
GCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTATTGTTCCTGTAA
TCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCATAAGGTTCACAATC
AATGGCCATTCTTACTTCAATTTAGTTCTAATAACAAACGTGTGAGGAGC
TGGTGACGTGCATGCTGTATCCATCAAAGGTTCAAGGACTAGATGGCAAC
CGATGTCGAGAAACTGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAAT
GGACAAAGCCTCTCTTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGT
TTCTTACCATGTTGCCCCTCCTAATTGGTCATTTGGGCAGACTTATACCG
G
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