DN617779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 8.272e-83 Identity = 142/221 (64.25%), Postives = 162/221 (73.30%), Query Frame = 1 Query: 58 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 YG W +AHATFY YGNLYS GYGTNTAALST LFN+G +CG+C+++ C ND QWCL GS+ VTATN CPP GGWC+PP HFD+++P F I YRAGIVPV YRRV C + GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF V S+G +V S +V P W FGQT+ Sbjct: 26 YGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTF 246
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 1.843e-82 Identity = 143/221 (64.71%), Postives = 168/221 (76.02%), Query Frame = 1 Query: 61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 GGW HATFY YGNL+SQGYG TAALSTALFN+G CGACF++ C +DP+WC+ GSIIV+ATNFCPP GGWC+PP HFDL++P F IAQYRAGIVPV +RRV C++ GGIRFTING+ YF+LVLITNV GAGD+ AVS+KGS+T +WQ MSRNWGQNWQSN+YL GQSLSF VT S+G +VVSY V P +W FGQT+ Sbjct: 30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTF 250
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81 Identity = 146/227 (64.32%), Postives = 169/227 (74.45%), Query Frame = 1 Query: 55 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC---ANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 G GGW +AHATFY YGNLYSQGYGTNTAALSTALFNNGLSCGACF++ C CL GS++VTATNFCPP GGWC+PP HFD+SQPVFQ IA ++AGIVPV YRRV C++ GGIRFTINGHSYFNLVL+TNV GAGDVHAV++K R+ WQ +SRNWGQNWQS + L+GQ+LSF VTT +G SVVS + P WSFGQT++ Sbjct: 60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFS 286
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.560e-81 Identity = 147/247 (59.51%), Postives = 173/247 (70.04%), Query Frame = 1 Query: 4 LWVILCVGFL-----SLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 LW+ + FL + + V G W NAHATFY YGNLYSQGYG NTAALSTALFNNG SCGACF+I C +DP+WC+ G SI+VTATNFCPP GGWC+PP HFDL+ P+F I YRAGIVPV YRRV C++ GGIRFT+NG YFNLVL+TNV GAGD++ VS+KGS+T W MSRNWGQNWQSN+ L GQSLSF VT S+ S S++VAP W FGQT++ Sbjct: 10 LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFS 256
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 5.928e-81 Identity = 140/222 (63.06%), Postives = 165/222 (74.32%), Query Frame = 1 Query: 61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 G W AHATFY YGNLYSQGYGTNTAALST+LFN+G SCGACF+I C NDP+WC G S+ VTATNFCPP GGWC+PP HFDL+ PVF IA+YRAGIVP+ YRRV C+++GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+T W ++RNWGQNWQSN+ L GQSLSF VT+S+ + S+++AP NW FGQT+ Sbjct: 32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTF 253
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 296.975 bits (759), Expect = 6.554e-80 Identity = 140/229 (61.14%), Postives = 165/229 (72.05%), Query Frame = 1 Query: 40 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 + V GGW AHATFY YGNLYSQGYG NTAALSTALFNNG SCGACF++ CA+DP+WC GS I +TATNFCPP GGWC+PP HFDL+ P+F IA+YRAGIVPV +RRV C++ GGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF VT+S+ S S+++AP NW FGQT+ Sbjct: 22 IPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTF 250
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.045e-77 Identity = 139/231 (60.17%), Postives = 162/231 (70.13%), Query Frame = 1 Query: 40 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDP--QWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 + G G W +AHATFY YGNLYSQGYG N AALSTALFN+G SCGACF+I C N P +WC GS I++TATNFCPP GGWC+PP HFDL+ P+F HIA+YRAGIVPV YRRV C++ GG+RFTING YFNLVLITNV GAGD+ S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF VT S+ + S++ AP W FGQT+ Sbjct: 27 IPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTF 257
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 8.291e-75 Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 1 Query: 4 LWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN----DPQWCLRG----SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIK---GSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 L V+L + SS G W +AHATFY YGN Y QGYGT+TAALS +F +GLSCGACF++ C D + CL SI+VTAT+ CP GGWC+PP HHFDLSQP F IA++++GIVPV YRRV C+R GG+RFTINGHSYFNLVL++NV GAGDVHAV++K G + RWQ M+RNWGQNWQS + L+GQ+LSF VTT + SVVSY+VAP W+FGQT+T Sbjct: 9 LLVLLSLSSSLSSSSAAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFT 259
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.083e-74 Identity = 136/240 (56.67%), Postives = 163/240 (67.92%), Query Frame = 1 Query: 4 LWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 L + V ++ + G GW + ATFY YGNLYS GYGT+TAALSTALFNNG SCGACF++ C CL G++ VTATN CPP GGWC+PP HFD+++P F IAQ RAG+VPV YRRV C + GGIRFTI GHSYFNLVL+TNV GAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LSF VT S+G +V S +VAP WSFGQT++ Sbjct: 6 LLAVAAVAAMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFS 244
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.412e-74 Identity = 134/231 (58.01%), Postives = 164/231 (71.00%), Query Frame = 1 Query: 55 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQW-CLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT------RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 G G W HATFY YGNLYSQGYGT+TAALSTALFN GLSCG+C+++ CA D + CL G ++ VTATNFCPP GGWC+PP HFDL++P F IA++ AGIVPV +RRV C R GG+RFT+NGH+YFNLVL+TNV GAGDV ++++KGS + RWQPMSRNWGQNWQSN+YL+G++LSF VT +G S+ VAP W FGQT+ Sbjct: 24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTF 254 The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bpback to top |