DN617779

Overview
NameDN617779
Unique NameDN617779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10459 contig Csv1_Contig10459:27..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.327e-64
Identity = 117/244 (47.95%), Postives = 157/244 (64.34%), Query Frame = 1
Query:   10 VILCVGFLSLVSSVQGYG---GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            ++     +  V +  G+    GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG C+ IMC  A  PQWC  G+ + +TATN CPP        GGWC+PP  HFD+++P +  I  Y+AGI+PV+Y++V+C R GGIRFT+ G ++F LVL++NV G+G V +VS+KG  T W  ++RNWG NWQ NS L GQ+LSF VT++ G ++  Y+V P  WSFG T+T
Sbjct:    5 ILFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFT 248          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 2.956e-64
Identity = 122/239 (51.05%), Postives = 153/239 (64.02%), Query Frame = 1
Query:   16 LCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            LC+  ++  ++      W  A ATFY              YGNLY QGYG + AALS ALFN+G SCG C+ I+C  +  PQWC  G+ + VTATN CPP        GGWC+PP  HFD+SQP ++ I  Y+AGIVPV+Y+RVRC R GG+RFT+ G +YF LVLITNV G+G V +  IKG+ T W  MSRNWG NWQS + L GQ+LSF VTT+ G  +    VAP  W FGQT++
Sbjct:   11 LCLAVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFS 249          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.242e-62
Identity = 115/221 (52.04%), Postives = 147/221 (66.52%), Query Frame = 1
Query:   64 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            GW+   ATFY              YGNLY QGYG N AALST LFNNG SCG C+ I+C  D  P  C  G+ I VT TNFCPP      GGWC+    HFD+SQP +++I  Y AGIVP++Y++V+C R+GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W  MSRNWG NWQ  + L GQ+LSF VT++ G ++V   V P  WSFGQT++
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFS 242          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 112/241 (46.47%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   10 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            +++ +   SL++      GW +  ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG C+QI C +  +P+WCL+G ++ +T TN CPP        GGWC+PP  HFD+++P +  I  Y+AGIVPV+Y+RV C + GG+RFT+ G +YF LVLI+NV G+G + +V +KG  T   P+SRNWG NWQS++ L GQ+L+F VT++ G ++V  ++ P  W FGQ+++
Sbjct:   15 LVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62
Identity = 115/228 (50.44%), Postives = 151/228 (66.23%), Query Frame = 1
Query:   49 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYHVAPPNWSFGQTY 696
            V GY   G W  AHATFY              YGNL++ GYG +TAALST LFN+G  CG CFQI C+  P      S +VTATN CPP        GGWC+PP  HFD+++P F  +A +RAGI+PV YRRV C+R+GG+RF   G+SY+ L+ + NV GAGD+ ++++KGSRT W  MS NWG ++Q+ S L GQSLSF VT+ + G ++ +++VAP NWS G+TY
Sbjct:   28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTY 255          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 114/220 (51.82%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   58 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPG------GWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSF-GQTY 696
            + GW +  ATFY              YG+L+ QGYG  TAALSTALFNNG  CGAC++IMC + PQWCL GSI +TATNFCPP        WC+PP  HFDLSQP+F  IA+Y+AG+VPV +RRV C + GG++F I G+ +F ++L  NV GAG V A+ IKG+RT+W  M +NWGQ W +   L GQ LSF +TTS+G       V PP+W   GQ++
Sbjct:   87 HSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDNWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSF 306          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.793e-61
Identity = 110/223 (49.33%), Postives = 141/223 (63.23%), Query Frame = 1
Query:   61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            G W  AHATFY              Y +   +GYG  T A+ST LF  G  CGAC+++ C + P  C  G+  ++VTATN CPP        GGWC+PP  HFDLS P F  IAQ +AGIVP+ YRRV C + GGIR+TI G+ YFNLV+++NV GAGDV  +S+KG+ R +W P+ RNWGQ WQ++  L G+SL+F V T +     S+HV PP+W FG TY
Sbjct:   40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTY 262          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.217e-61
Identity = 110/220 (50.00%), Postives = 146/220 (66.36%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W+   ATFY              YGNLY QGYG N AALST LFN+G SCG C+ I+C  +  P WC  G +I VT TN+CPP      GGWC+    HFD+SQP +++I  Y AGI+P++Y++V+C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS T W  M+RNWG NWQ  + L GQ+LSF VT++ G ++V     P  WSFGQT++
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.165e-58
Identity = 112/239 (46.86%), Postives = 150/239 (62.76%), Query Frame = 1
Query:    7 WVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            +++  +  +S +S      GWI AHAT+Y              Y N Y  G+G +TAALS  LF +G SCG C+Q+ C    DP+WCLRG+ + VTATNFCP     GWC+ P HHFD+S P F  IA+    GIVPV YRRV CKR GG+RFT+ G   FN+V+I+NV G G V +V+++GS+ + W  M+RNWG NWQS+  L GQ LSF VT ++  +    +V P +W FGQT++
Sbjct:    7 YLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFS 245          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.399e-58
Identity = 109/219 (49.77%), Postives = 140/219 (63.93%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            W  A AT+Y              YG+L   GYG  T  LS  LF  G  CGACF++ C +D +WC+ G SII+TATNFC P        GG C+PPN HF L    F+ IA ++AG +PV YRR+ C++ G +RFT++G   F  VLITNV G+GD+ AV IKGSRT W PM RNWGQNW  N+ L  Q+LSF VT+S+  +V SY+V+P NW++GQT+
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTF 258          
The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
EXP25_ORYSJ1.327e-6447.95Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ2.956e-6451.05Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ORYSJ1.242e-6252.04Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ2.766e-6246.47Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH4.719e-6250.44Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP24_ARATH6.163e-6251.82Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP32_ORYSJ1.793e-6149.33Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ5.217e-6150.00Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH3.165e-5846.86Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP13_ARATH5.399e-5849.77Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bp
GCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCATTGGTCTCATCCGT
TCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTTCTATGGAGGTG
GTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACGGCAATTTGTAC
AGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCACTGCTTTGTTCAA
CAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTGCGCTAATGACC
CGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCACTAACTTTTGC
CCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTTGATCTCTCTCA
GCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTATTGTTCCTGTAA
TCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCATAAGGTTCACAATC
AATGGCCATTCTTACTTCAATTTAGTTCTAATAACAAACGTGTGAGGAGC
TGGTGACGTGCATGCTGTATCCATCAAAGGTTCAAGGACTAGATGGCAAC
CGATGTCGAGAAACTGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAAT
GGACAAAGCCTCTCTTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGT
TTCTTACCATGTTGCCCCTCCTAATTGGTCATTTGGGCAGACTTATACCG
G
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