DN617779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.571e-57 Identity = 115/243 (47.33%), Postives = 151/243 (62.14%), Query Frame = 1 Query: 19 CVGFLSLVS----SVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYHVAPPNWSFGQTY 696 C+ LS+++ S+ Y G W A ATFY YGN+Y GYG T ALSTALFN G +CG CFQ+ C + P C GS +VTATN CPP GGWC+PP HFDL++P F IA ++AGI+PV YRRV CK+ GGIRF G+ Y+ LV + NV G GD+ +++KGSRT W MS NWG ++Q+ S L GQSLSF +T+ + ++ +Y+ AP +WS G+TY Sbjct: 9 CLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTY 250
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 1.737e-56 Identity = 111/212 (52.36%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG-WCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 W +A A +Y YG+L GYG TAALSTALFN+G SCGAC++IMC+ +PQ CL GSI +TAT+ CPPG WC PN HFDLS P+F IAQ +A +VPV YRRV C + GG++F + G+ +L NV GAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S VTTS+G + V P +W FGQT+ Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTF 256
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.869e-56 Identity = 105/214 (49.07%), Postives = 140/214 (65.42%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W+ ATFY YGNLY Q YG N AALST LFN+G SCG C+ I+C P WC G +I VT TN+ GGWC+ +FD+SQP +++I Y AGIVP++Y++V+C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G ++V P WSFGQT++ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY---GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55 Identity = 105/220 (47.73%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W +A A++Y +G+L GYG T LSTALF G +CG C+++ C +D ++CL G SI+VTATNFC P GG C+PPNHHF L F+ IA ++AG++P+ YRRV C R+GG+RF + G S+F VLI+NV GAGDV +V IKG+ + W M RNWGQ W NS GQ LSF +T+S+G ++ +Y+V P W FG+TYT Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYT 251
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.530e-55 Identity = 104/197 (52.79%), Postives = 131/197 (66.50%), Query Frame = 1 Query: 136 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 YG+L YG TA +S ALF G +CG C+++ C N WCLRGS ++VTAT+FC P GGWC+ P HF++S+ F +A+ +A IVPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRT W PM RNWGQNWQ ++ L GQ LSF VT G +VV+Y VAPP+W F QT+ Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTF 253
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.773e-54 Identity = 109/224 (48.66%), Postives = 138/224 (61.61%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP----------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIK-GSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYHVAPPNWSFGQTY 696 W AHATFY YGNLY+ GYGT+TAALST LF +G CG C+Q+ C C RGS I VTATN CPP GGWC+PP HFDLS+P F +A +RAGIVPV+YRRV C R GG+RF + G+ Y+ L + NV GAGDV + +K G W MS NWG ++Q+ + L GQ+LSF VT+ + G ++++ V P +W FG TY Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53 Identity = 100/197 (50.76%), Postives = 129/197 (65.48%), Query Frame = 1 Query: 136 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 YG+L + +A LS LFN G SCGAC ++ C N +WCL+GS ++VTAT+FCPP GGWC+ P H +LS F IA+ RA ++P+ YRRV+C R GG+RF+++G S+F VLI+NV G+V V +KG T W PM+RNWGQNW S+ L GQSLSF VT G ++ SY VAPP W FG TY Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTY 249
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.427e-42 Identity = 89/217 (41.01%), Postives = 130/217 (59.91%), Query Frame = 1 Query: 61 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPN----HHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 G W++ HATFY G + GYG TAA+S ALF+NG CGAC+++ + +++VTATN PP P N HFDL+ P F IA+ + G+VPV YR+V C R GGI++TI G+ +N+V++ NV GAGDV +++KG+ R +W P+ R+WGQ W++ + L G+SL+F V T + S+ VAP +W++ TY Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPP-----PVNGMKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37 Identity = 83/194 (42.78%), Postives = 113/194 (58.25%), Query Frame = 1 Query: 160 YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNV*GAGDVHAVSIK--GSRTRWQPMSRNWGQNWQSNSYL-NGQSLSFVVTT--SNGHSVVSYHVAPPNWSFGQTY 696 Y T TAALST LF +G CG C+++ C P WC GS +++T TN CPP GGWC+PP HHFD++ P F +AQ AGIVPV YRRV C+R GG+RF + G+ Y+ L+ + NV GAGDV ++S+K G W + NWG +Q + L N L+ +TT + +++ P W G Y Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCY 277
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21 Identity = 76/256 (29.69%), Postives = 116/256 (45.31%), Query Frame = 1 Query: 1 ALWVILCVGFLSLVSSVQGY---GGWINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG---GIRFTINGHSYFNLVLITNV*GAGDVHAVSI-----KGSRTRWQPMSRNWGQNWQSNSYLNGQS-----LSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 A + C S V+SV + GW AT+Y Y G++ + + AA S +++ +G CG+C+Q+ C+ +P C + V T+ C PGG C HFDLS F +A+ AG +PV Y RV CK G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ NS G + +S +T+ +G ++V+ +V P W G TY Sbjct: 13 AFVALACCVLRSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLC-PGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263 The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bpback to top |