DN617779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = 1 Query: 25 GFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSR--TRWQPMSRNWGQNWQSNSYLN---GQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 G S +S +GYG W + AT+Y Y + Q + + AA +LF NG CG+C+QI C + + C + V T+ C PGG C HFD+S F +A AG++ + Y+RV C+ + F ++ S Y+ +L+ G GD+ AV I +R W+ M ++WG W+ NS S +T+ +G +V+ +V P W G TY Sbjct: 32 GRRSTMSLGRGYG-WSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC-PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 1 Query: 64 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIN--GHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSL----SFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 GW A AT+Y Y Q + + AA S +L+ G CGAC+++ C + C V T+ CP GG C HFD+S +A+ AGI+ V YRRV CK +G I F ++ + ++ VLI G GD++AV + + W PM +NWG W+ NS G++L S +T+ +G +V+ +V P +W G TY Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP-GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 71/224 (31.70%), Postives = 102/224 (45.54%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W+ A AT+Y YG L + A++ LF NG CGAC+++ C D C R ++ V T+ CP C + HFDLS VF +A G++PVIYRR CK G I F +N S ++ +L+ G GD+ ++ I+ + R W M WG NW L G + T S G ++ + V P NW+ TY+ Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECP---GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYS 255
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 68/224 (30.36%), Postives = 102/224 (45.54%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W+ A AT+Y YG+L + + A+S LF G CGAC+++ C D C + ++ + AT+ P G + HFDLS F H+A G++ ++YRR CK G I F +N S Y+ +LI G GD+ ++ I+ + ++ W M WG NW L G + T SN ++ + V P NW TYT Sbjct: 40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL-DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYT 262
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 71/227 (31.28%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFTI-----NGHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W N AT+Y Y Q + + AA S +++ +GL CG+C+Q+ C+ + C + V T+ C PGG C HFDLS F +A Q R AG++ + Y RV C GG+ T + SYF VL+ G GD+ + + G+ W PM ++WG W+ ++ Q+ LS +T+S+G ++V+ +V P W G +YT Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18 Identity = 67/225 (29.78%), Postives = 108/225 (48.00%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFT----INGHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 W N AT+Y Y G ++ + + AA S +++ +GL CG+C+Q+ C + C + V T+ C PGG C HFDLS F +A Q R AG++ + Y RV C GG++ T + + + VL+ G GD+ V + G+ W M ++WG W+ N+ Q+ S +T+S+G ++V+ +V P W G +Y Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18 Identity = 71/224 (31.70%), Postives = 98/224 (43.75%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-*GAGDVHAVSIK-GSRTRWQPMSRNWGQNWQ-SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W A AT+Y YG L T A+S LF G CGAC+++ C D C R ++ V T+ C PGG C HFDLS F +A G + V+YRR CK G I F +N G + F L L+ G GD+ ++ +K + +WQ M WG W + L G + T + ++ + V P NW+ TYT Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIVTDEC-PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYT 266
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16 Identity = 69/245 (28.16%), Postives = 107/245 (43.67%), Query Frame = 1 Query: 43 SSVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWC-LRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTI--NGHSYFNLVLITNV*GAGDVHAVSIKGSRTR-----------WQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 SS G GGW+NA AT+Y G N+ + T+ + LF +G CG+C+QI C P L ++I+T N+ P +HFDLS F +A+ AGI+ + +RRV C+ G + F + + + +L+ G GDV V + SR W PM +WG W+ +N L G S +T +G ++++ V P +W Y+ Sbjct: 84 SSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQPNTVYS 321
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 71/224 (31.70%), Postives = 96/224 (42.86%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRA-------GIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-*GAGDVHAVSIK-GSRTRWQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W A AT+Y YG+L ++S LF +G CGAC+++ C D C R ++ V T+ C PGG C HFDLS F +A A G + V+YRR CK G I F +N G + F L L+ G GD+ ++ IK + W M WG W L G + T S ++ + V P NW TYT Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC-PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYT 269
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 65/225 (28.89%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTINGHSYFN--LVLITNV*GAGDVHAVSIKGS--RTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 W A +T+Y YGN +Q + +A +LF +G CGAC+Q+ C + C + + V T+ CP C + HFDLS F +A Q R G + ++Y++V C G + F ++ S N VL+ V G G++ + +K + +W MS++WG W+ +S L V + +G +VV+ +V P NW G Y Sbjct: 47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSKNPVTVVITDECP---GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIY 267 The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bpback to top |