DN617779

Overview
NameDN617779
Unique NameDN617779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10459 contig Csv1_Contig10459:27..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = 1
Query:   25 GFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSR--TRWQPMSRNWGQNWQSNSYLN---GQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            G  S +S  +GYG W +  AT+Y              Y +   Q  + +  AA   +LF NG  CG+C+QI C  + + C    + V  T+ C PGG C     HFD+S   F  +A          AG++ + Y+RV C+    + F ++  S  Y+  +L+    G GD+ AV I  +R    W+ M ++WG  W+ NS          S  +T+ +G  +V+ +V P  W  G TY
Sbjct:   32 GRRSTMSLGRGYG-WSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC-PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 1
Query:   64 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIN--GHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSL----SFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            GW  A AT+Y              Y     Q  + +  AA S +L+  G  CGAC+++ C  +   C      V  T+ CP GG C     HFD+S      +A+         AGI+ V YRRV CK +G  I F ++   + ++  VLI    G GD++AV +  +   W PM +NWG  W+ NS   G++L    S  +T+ +G  +V+ +V P +W  G TY
Sbjct:   63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP-GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 71/224 (31.70%), Postives = 102/224 (45.54%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W+ A AT+Y              YG L   +       A++  LF NG  CGAC+++ C  D   C R ++ V  T+ CP    C   + HFDLS  VF  +A           G++PVIYRR  CK  G  I F +N  S  ++  +L+    G GD+ ++ I+ +  R W  M   WG NW      L G     + T S G ++ +  V P NW+   TY+
Sbjct:   36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECP---GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYS 255          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 68/224 (30.36%), Postives = 102/224 (45.54%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W+ A AT+Y              YG+L   + +     A+S  LF  G  CGAC+++ C  D   C + ++ + AT+  P G      + HFDLS   F H+A           G++ ++YRR  CK  G  I F +N  S  Y+  +LI    G GD+ ++ I+ + ++ W  M   WG NW      L G     + T SN  ++ +  V P NW    TYT
Sbjct:   40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL-DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYT 262          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 71/227 (31.28%), Postives = 110/227 (48.46%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFTI-----NGHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W N  AT+Y              Y     Q  + +  AA S +++ +GL CG+C+Q+ C+ +   C    + V  T+ C PGG C     HFDLS   F  +A      Q R AG++ + Y RV C   GG+  T      +  SYF  VL+    G GD+  + +   G+   W PM ++WG  W+ ++    Q+ LS  +T+S+G ++V+ +V P  W  G +YT
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 67/225 (29.78%), Postives = 108/225 (48.00%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFT----INGHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            W N  AT+Y              Y G ++   + +  AA S +++ +GL CG+C+Q+ C  +   C    + V  T+ C PGG C     HFDLS   F  +A      Q R AG++ + Y RV C   GG++ T    +  +  +  VL+    G GD+  V +   G+   W  M ++WG  W+ N+    Q+  S  +T+S+G ++V+ +V P  W  G +Y
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 71/224 (31.70%), Postives = 98/224 (43.75%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-*GAGDVHAVSIK-GSRTRWQPMSRNWGQNWQ-SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W  A AT+Y              YG L       T   A+S  LF  G  CGAC+++ C  D   C R ++ V  T+ C PGG C     HFDLS   F  +A           G + V+YRR  CK  G  I F +N G + F L L+     G GD+ ++ +K  +  +WQ M   WG  W  +   L G     + T +   ++ +  V P NW+   TYT
Sbjct:   45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIVTDEC-PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYT 266          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 69/245 (28.16%), Postives = 107/245 (43.67%), Query Frame = 1
Query:   43 SSVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWC-LRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTI--NGHSYFNLVLITNV*GAGDVHAVSIKGSRTR-----------WQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            SS  G GGW+NA AT+Y               G  N+    +   T+  +  LF +G  CG+C+QI C   P    L  ++I+T  N+ P         +HFDLS   F  +A+         AGI+ + +RRV C+  G  + F +    +  +  +L+    G GDV  V +  SR             W PM  +WG  W+  +N  L G   S  +T  +G ++++  V P +W     Y+
Sbjct:   84 SSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQPNTVYS 321          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 71/224 (31.70%), Postives = 96/224 (42.86%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRA-------GIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-*GAGDVHAVSIK-GSRTRWQPMSRNWGQNW-QSNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699
            W  A AT+Y              YG+L           ++S  LF +G  CGAC+++ C  D   C R ++ V  T+ C PGG C     HFDLS   F  +A   A       G + V+YRR  CK  G  I F +N G + F L L+     G GD+ ++ IK  +   W  M   WG  W      L G     + T S   ++ +  V P NW    TYT
Sbjct:   48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC-PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYT 269          
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 65/225 (28.89%), Postives = 104/225 (46.22%), Query Frame = 1
Query:   67 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTINGHSYFN--LVLITNV*GAGDVHAVSIKGS--RTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696
            W  A +T+Y              YGN  +Q  +    +A   +LF +G  CGAC+Q+ C +    C +  + V  T+ CP    C   + HFDLS   F  +A      Q R  G + ++Y++V C   G  + F ++  S  N   VL+  V G G++  + +K +    +W  MS++WG  W+   +S L       V +  +G +VV+ +V P NW  G  Y
Sbjct:   47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSKNPVTVVITDECP---GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIY 267          
The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
EXPB5_ORYSJ2.620e-2030.13Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB11_ORYSJ7.622e-2032.30Expansin-B11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB3_ARATH1.300e-1931.70Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 ... [more]
EXPB1_ARATH4.940e-1930.36Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 ... [more]
EXB18_ORYSJ4.940e-1931.28Expansin-B18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB15_ORYSJ1.101e-1829.78Expansin-B15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB16_ORYSJ4.182e-1831.70Expansin-B16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB7_ORYSJ1.757e-1628.16Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB17_ORYSJ2.997e-1631.70Expansin-B17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB2_ARATH5.112e-1628.89Putative expansin-B2 OS=Arabidopsis thaliana GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01K21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bp
GCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCATTGGTCTCATCCGT
TCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTTCTATGGAGGTG
GTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACGGCAATTTGTAC
AGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCACTGCTTTGTTCAA
CAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTGCGCTAATGACC
CGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCACTAACTTTTGC
CCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTTGATCTCTCTCA
GCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTATTGTTCCTGTAA
TCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCATAAGGTTCACAATC
AATGGCCATTCTTACTTCAATTTAGTTCTAATAACAAACGTGTGAGGAGC
TGGTGACGTGCATGCTGTATCCATCAAAGGTTCAAGGACTAGATGGCAAC
CGATGTCGAGAAACTGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAAT
GGACAAAGCCTCTCTTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGT
TTCTTACCATGTTGCCCCTCCTAATTGGTCATTTGGGCAGACTTATACCG
G
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