DN617779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16 Identity = 71/243 (29.22%), Postives = 109/243 (44.86%), Query Frame = 1 Query: 40 VSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS---YFNLVLITNV*GAGDVHAVSIKGSRTR-------WQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 VS YG GW+ A AT+Y G N+ + + T+ + +F +G CG+C+QI C DP C ++I+T N+ P +HFDLS F +A+ +GI+ + +RRV C G I F + S YF VL+ GDV V + S++ W PM +WG W+ +S Q+ S + + +G ++V+ +V P NWS Y Sbjct: 34 VSDASAYGSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYPVA------RYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIPANWSPNSNY 268
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15 Identity = 69/229 (30.13%), Postives = 109/229 (47.60%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIV--TATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN---GHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W++A AT+Y Y ++ + + A + +F +GL CG+CF+I C + P C ++V T N+ P +HFDL+ F +A+ +AGI+ + +RRV+CK + + F + G +Y L L+ V G GD+ AV + KGS T ++P+ +WG W+ S+ L G L+ +TT G V V P NW YT Sbjct: 50 WLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECSGKPVVVHITDMNYEPIAA------YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDT-YEPLKHSWGAIWRKDSDKPLKG-PLTVRLTTEGGTKSVYDDVIPANWKANTAYT 268
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15 Identity = 66/231 (28.57%), Postives = 102/231 (44.16%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLR-GSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNV*GAGDVHAVSI-----KGSRTR-WQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 W+ A AT+Y G N + + T+ + LF +G CGAC+QI C N+P + ++I+T N+ P +HFDLS F +A+ AGI+ + +RRV C G + F + S + VL+ G V + + G TR W PM R+WG W+ +N L G S + + +G +V+++ V P NW Y Sbjct: 31 WLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVA------RYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQG-PFSLRMVSESGQTVIAHQVIPANWRANTNY 254
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15 Identity = 64/231 (27.71%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 61 GGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHSYFN----LVLITNV*GAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 G W+ A AT+Y G N+ Y TA + +F +G CG+C+++ C P+ C ++ +T N+ P +HFDLS F +A+ GI+ V +RRVRCK G + + N VL+ V GD+ + I+ W+PM +WG W+ ++ L G S +T+ +G V++ V P NW YT Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVYITDMNYEPIA------PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYT 263
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15 Identity = 63/231 (27.27%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 61 GGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHSYFN----LVLITNV*GAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 G W+ A AT+Y G N+ Y TA + +F +G CG+C+++ C P+ C ++ +T N+ P +HFDLS F +A+ GI+ V +RRVRCK G + + N VL+ V GD+ + I+ W+PM +WG W+ ++ L G S +T+ +G V++ + P NW YT Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVFITDMNYEPIA------PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDIIPANWRPDAVYT 263
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14 Identity = 65/229 (28.38%), Postives = 104/229 (45.41%), Query Frame = 1 Query: 58 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYG--TNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS---YFNLVLITNV*GAGDVHAVSIKGSRT-------RWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNW 678 +G W A AT+Y G ++ Y + T+ + LF +G CG+C++I C D R ++I+T N+ P + HFDLS F +A+ +GI+ + + RV C+ G I F + +S YF VL+ G GDV V + S+T RW PM +WG W+ ++ Q+ S + +G ++V+ +V P NW Sbjct: 52 WGPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPF------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPANW 273
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 66/232 (28.45%), Postives = 108/232 (46.55%), Query Frame = 1 Query: 58 YGG-WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIV--TATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTING--HSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 YG W++A AT+Y Y ++ + + A + +F +GL CG+CF+I C + P C ++V T N+ P +HFDL+ F +A+ +AGI+ + +RRV+CK + F + + + +L+ V G GD+ AV I KGS T ++P+ +WG W+ S+ + G ++ +TT G V V P W YT Sbjct: 45 YGSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDMNYEPIAA------YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDT-YEPLKHSWGAIWRKDSDKPIKG-PITVQLTTEGGTKTVYDDVIPAGWKPNTAYT 267
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 193 LFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDP-PNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTI-----NGHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 +F +G CG+CF++ C+ P+ C +I+ T+ +P +HFDLS F +A+ +AGI+ + +RRVRCK G + T + +YF VL+ V G GDV V + KGS W+P++ +WG W+ ++ L G S VTT + +V+ V P NW Y Sbjct: 85 IFKDGKGCGSCFEVKCSK-PEACSDKPVIIHITDMN-----TEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYF-AVLVKYVGGDGDVVKVELKEKGSE-EWKPLNESWGAIWRIDTPKPLKG-PFSLRVTTESDQKLVANDVIPDNWKANALY 260
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 68/236 (28.81%), Postives = 105/236 (44.49%), Query Frame = 1 Query: 64 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPG--------GWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTINGHSYFN--LVLITNV*GAGDVHAVSI----KGSRTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 GW N AT+Y Y Q + + AA S ++++G CG+C++++CA + + C + V T+ P G G C HFD+S F +A Q R AG++ + Y RV C+ G G+ F ++ S N +L+ D+ AV I G+ W PM ++WG W+ S S L G S +T S+G V+ + P W+ G Y Sbjct: 38 GWSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGN-EACSGIPVTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVWRLNSGSALQG-PFSVRLTFSSGQMFVASNAIPAGWNPGMAY 271
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 59/221 (26.70%), Postives = 100/221 (45.25%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNV*GAGDVHAVSI-KGSRTRWQPMSRNWGQNWQSNSYLNGQS-LSFVVTTSNGHSVVSYHVAPPNW 678 W+ A AT+Y G N+ Y + + +F +G CG+C+++ C P C + ++ +T N+ P + HFD S F +A +AGI+ + +RRVRCK GG + T + + + VL+ V GDV + + + W+PM +WG W+ ++ ++ S VTT +G S+++ V P NW Sbjct: 43 WLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPISAY------HFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKAPFSIRVTTESGKSLIAKDVIPVNW 256 The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bpback to top |