DN617779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 65/223 (29.15%), Postives = 99/223 (44.39%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS---YFNLVLITNV*GAGDVHAVSIKGSRTR-WQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWS 681 W A AT+Y G N + + T+ + +F +G CG+C+QI C N P C ++I+T N+ P +HFDLS F +A+ AGI+ + ++RV C G + F + S YF VL+ G GDV V + + ++ W PM +WG W+ SN L S +T +G +V+ V P NW+ Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTA-PFSLRITNESGKQLVASQVIPANWA 255
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13 Identity = 61/204 (29.90%), Postives = 90/204 (44.12%), Query Frame = 1 Query: 157 GYGTNTA---------ALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGG---IRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSL--SFVVTTSNGHS---VVSYHVAPPNWSFGQTY 696 GYG+ A A +LFNNG CG C+Q++C P C I VT T+ C PGG C H DLS +A+ AG++ V Y+R C G R + Y+ ++ G GD+ V I+ + + M W+ NS G +L F + ++G S +V+Y+V P NW ++Y Sbjct: 55 GYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPA-CSGSPITVTITDEC-PGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAGGSFISMQEMRSAVWKVNS---GSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESY 253
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 61/230 (26.52%), Postives = 97/230 (42.17%), Query Frame = 1 Query: 46 SVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG---GIRFTINGHSYFNLVLITNV*GAGDVHAVSIKGSRT---RWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWS 681 ++ G W NA AT+Y G + + T+ + L+ G CG+C+++ C +P ++ +T N+ P +HFDLS F +A+ RAGI+ V + RV C+ G G + VL+ G GDV V +K + RW PM +WG W+ SN L S + + +G ++V+ V P NW+ Sbjct: 41 AIGGAAAWGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPLS------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWRLDSNHRLRA-PFSIRIRSDSGKTLVAPDVIPLNWT 263
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 63/232 (27.16%), Postives = 100/232 (43.10%), Query Frame = 1 Query: 58 YGG-WINAHATFYXXXXXXXXXXXXXX---YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNV*GAGDVHAVSIK-GSRTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 YG W+ A ATFY Y ++ + TA + +F +GL C AC++I C +P C ++V T+ + +HFDLS F +A+ +AG + + +RRV+CK G + T + + ++ +L+ G G++ AV IK + PM +WG W+ L G S +T+ G +V V P NW YT Sbjct: 14 YGSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVECSGEPVLVKITD----KNYEHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKG-PFSIRLTSEGGAHLVQDDVIPANWKPDTVYT 239
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 193 LFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPP--NHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNV*GAGDVHAVSI--KGSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTY 696 +F +G CG+CF+I C+ P+ C ++ T+ D P +HFDLS F +A+ +AGI+ +RRV+CK + T + + + +L+ V G GDV V I KGS W+ + +WG W+ ++ L G S VTT G +++ P W Y Sbjct: 85 IFKDGKGCGSCFEIKCSK-PEACSDKPALIHVTDM------NDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSE-EWKALKESWGAIWRIDTPKPLKG-PFSVRVTTEGGEKIIAEDAIPDGWKADSVY 260
BLAST of DN617779 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 61/228 (26.75%), Postives = 98/228 (42.98%), Query Frame = 1 Query: 67 WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDP-PNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHSYFN----LVLITNV*GAGDVHAVSIK-GSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYHVAPPNWSFGQTYT 699 W++A +T+Y Y N+ + T +T +F +G CG+CF+I C P+ C ++ VT T+ +P +HFDLS F +A+ AG + + +RRV+CK + T + N +L+ V G GDV AV IK + +W + +WG W+ ++ L G + TT G V P W +Y+ Sbjct: 41 WLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKCTK-PESCSGEAVTVTITDDNE-----EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTG-PFTVRYTTEGGTKSEFEDVIPEGWKADTSYS 261 The following BLAST results are available for this feature:
BLAST of DN617779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617779 ID=DN617779; Name=DN617779; organism=Citrus sinensis; type=EST; length=701bpback to top |