DN617778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.484e-29 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 FNLVL+TNV G GDV +VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF V S+G +V S NV P W FGQT+ G QF Sbjct: 170 FNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.684e-28 Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVL+TNV GAGDV VS+KGS T+W +SRNWGQNWQSN+ L GQSLSF V TS+G S S N+AP NW FGQTY+G+ FR Sbjct: 175 FNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.036e-27 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVL+TNV GAGD++ VS+KGS+T W MSRNWGQNWQSN+ L GQSLSF VT S+ S S+NVAP W FGQT++G+ FR Sbjct: 179 FNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 3.965e-27 Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 FNLVL+TNVGGAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LSF VT S+G +V S NVAP WSFGQT++G QF Sbjct: 167 FNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27 Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRT------RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 FNLVL+TNVGGAGDV ++++KGS + RWQPMSRNWGQNWQSN+YL+G++LSF VT +G S+ +VAP W FGQT+ GRQF Sbjct: 172 FNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.179e-27 Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 FNLVL+TNVGGAGDVHAV++K R+ WQ +SRNWGQNWQS + L+GQ+LSF VTT +G SVVS N P WSFGQT++G QF Sbjct: 208 FNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.570e-26 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVLITNV GAGD+ S+KGS+T W ++RNWGQNWQSN+ L GQSLSF VT+S+ + S+N+AP NW FGQT+ G+ FR Sbjct: 177 FNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 5.726e-26 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF VT+S+ S S+N+AP NW FGQT+ G+ FR Sbjct: 174 FNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFR 256
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.666e-25 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVLITNV GAGD+ S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF VT S+ + S+N AP W FGQT+ G+ FR Sbjct: 181 FNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFR 263
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.666e-25 Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 549 FNLVLITNV GAGD+ S+KGSRT W +SRNWGQNWQSN+ L GQ+LSF VT S+ + S+N+ P NW FGQT+ G+ FR Sbjct: 174 FNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256 The following BLAST results are available for this feature:
BLAST of DN617778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617778 ID=DN617778; Name=DN617778; organism=Citrus sinensis; type=EST; length=551bpback to top |