DN617778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25 Identity = 52/83 (62.65%), Postives = 66/83 (79.52%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQF 549 F LVL++NVGG G + +VSIKGSRT W MSRNWG NWQSN+YL+GQSLSF VT+S+G ++ +VAP W+FGQT+ T +QF Sbjct: 178 FELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQQF 260
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 F VLITNV G+GD+ AV IKGSRT W PM RNWGQNW N+ L Q+LSF VT+S+ +V SYNV+P NW++GQT+ G+QF Sbjct: 182 FISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.036e-23 Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = -3 Query: 316 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT 549 F LV +TNVGG+G V +SIKGS T W MSRNWG NWQSN+YL GQSLSF+V +G V ++NVAP NW FG TY+ Sbjct: 172 FELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.036e-23 Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 F VLITNV G+V AV +KGSRT W PM RNWGQNWQ ++ L GQ LSF VT G +VV+Y+VAPP+W F QT+ G+QF Sbjct: 177 FLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.660e-23 Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT-GRQF 549 F LVLITNVGG G + +V IKG++T W MSRNWG NWQ+N+YLN Q++SF VT++ G ++V +VAP NW FGQT+T G QF Sbjct: 167 FELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.474e-23 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = -3 Query: 316 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT 549 F LV I NVGGAG + +VSIKGS+T W MSRNWG NWQSN+YL+GQ+LSF +TT++G + V NV P +WSFGQ Y+ Sbjct: 170 FELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.925e-23 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = -3 Query: 316 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT 549 F LV + NVGG+G V VSIKGS+T W MSRNWGQNWQSN+YLN QSLSF V + V +N+AP NW+FG TYT Sbjct: 166 FELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.252e-22 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 F VLI+NVGGAGDV +V IKG+ + W M RNWGQ W NS GQ LSF +T+S+G ++ +YNV P W FG+TYTG+QF Sbjct: 174 FLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = -3 Query: 319 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY 549 + LVL+TNV G+G V A +KGS T W MSRNWG+NWQSN+YL GQ+LSF V +G V +Y+VAP NW FG TY Sbjct: 170 YELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.906e-21 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 549 F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSF VT G ++ SY+VAPP W FG TY G+QF Sbjct: 173 FFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254 The following BLAST results are available for this feature:
BLAST of DN617778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617778 ID=DN617778; Name=DN617778; organism=Citrus sinensis; type=EST; length=551bpback to top |