DN617778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.043e-19 Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSR-TRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFR 549 FNLVL+TNV G + ++ I GS T W PM RNWG NW S SYL GQ+LSF VT +G ++V N+ P W FGQT+T + QF+ Sbjct: 178 FNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSKLQFK 262
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 8.854e-19 Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQFRY 549 F LVLITNV G+G V + IKG+ T W MSRNWG NWQS + L GQ+LSF VTT+ G + +VAP W FGQT+ T +QF Y Sbjct: 172 FELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQQFDY 256
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-18 Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSR-TRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFR 549 FNLVL+TNV G + ++ I GS T W PM RNWG NW S SYL GQ LSF VT +G ++V N+ P W FGQT+ + QF+ Sbjct: 194 FNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 278
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFR 549 F LVL+TNV AG + ++ + GS T W PM+RNWG W S +YL GQ LSF VT ++ ++V NV PP W FGQT+ + QF+ Sbjct: 183 FQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASKLQFK 267
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18 Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQFRY 549 F LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G ++V + P WSFGQT+ T QF Y Sbjct: 165 FELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFSTYHQFDY 249
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18 Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQFRY 549 F LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G ++V + P WSFGQT+ T QF Y Sbjct: 156 FELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFSTYHQFDY 240
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = -3 Query: 304 FNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT--GRQF 549 FN+V+I+NVGG G V +V+++GS+ + W M+RNWG NWQS+ L GQ LSF VT ++ + NV P +W FGQT++ GRQF Sbjct: 167 FNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = -3 Query: 319 LVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYNVAPPNWSFGQTY 543 L+ + NVGGAGD+ ++++KGSRT W MS NWG ++Q+ S L GQSLSF VT+ + G ++ ++NVAP NWS G+TY Sbjct: 180 LIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTY 255
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 310 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR 549 F ++L NVGGAGD+ + +KG +T W M +NWGQNW + L GQ +SF VTTS+G + NV P NW FGQT+ G+ Sbjct: 194 FLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 273
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 310 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR 549 F ++L NVGGAGD+ + +KG +T W M +NWGQNW + L GQ +SF VTTS+G + NV P NW FGQT+ G+ Sbjct: 187 FLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 266 The following BLAST results are available for this feature:
BLAST of DN617778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617778 ID=DN617778; Name=DN617778; organism=Citrus sinensis; type=EST; length=551bpback to top |