DN617778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18 Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = -3 Query: 310 VLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR 540 +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S VTTS+G + +V P +W FGQT+ G+ Sbjct: 183 ILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDGK 259
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.279e-17 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSR-TRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFR 549 FNLVL+TNV G + ++ + GS T W PM RNWG NW S SYL GQ LSF VT +G ++V N+ P W FGQT+ + QF+ Sbjct: 196 FNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 280
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.670e-17 Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFRY 549 F LVLI+NV G+G + +V +KG T P+SRNWG NWQS++ L GQ+L+F VT++ G ++V N+ P W FGQ+++ QF Y Sbjct: 176 FELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFSSNLQFSY 260
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.848e-17 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = -3 Query: 301 FNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR-QFR 549 F LVL+TNVG AG + A+ +KGS++ W M+ NWG W S +YL GQ LSF VT ++G ++V NV P W FGQT+ QF+ Sbjct: 178 FQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFASNIQFK 262
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.162e-16 Identity = 34/82 (41.46%), Postives = 57/82 (69.51%), Query Frame = -3 Query: 307 FNLVLITNVGGAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQ 549 +N+V++ NVGGAGDV +++KG+ R +W P+ R+WGQ W++ + L G+SL+F V T + S+ VAP +W++ TY ++ Sbjct: 207 YNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTYQAKK 288
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.666e-15 Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 310 LVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYNVAPPNWSFGQTYTGR 543 LV + NVGG GD+ +++KGSRT W MS NWG ++Q+ S L GQSLSF +T+ + ++ +YN AP +WS G+TY + Sbjct: 175 LVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTYQSK 253
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 7.756e-15 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = -3 Query: 310 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSF-GQTYTGR 549 F ++L NVGGAG V A+ IKG+RT+W M +NWGQ W + L GQ LSF +TTS+G +V PP+W GQ++ G+ Sbjct: 229 FLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDGK 309 The following BLAST results are available for this feature:
BLAST of DN617778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617778 ID=DN617778; Name=DN617778; organism=Citrus sinensis; type=EST; length=551bpback to top |