DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_SILST (50S ribosomal protein L3 OS=Silicibacter sp. (strain TM1040) GN=rplC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.029e-37 Identity = 88/216 (40.74%), Postives = 120/216 (55.56%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVXLLPFP 650 +IA K G+T + + G +IPV+VL +D V +T +K+G+ ++Q+G G K K ++K GHF A V KRKL EF V D L+ +G + HF+ GQ VD+ RW F G+ ASHG S+SHRS GSTGQ PGKVF + T +N+ V K D R L++++G VPG +V +KDAV KK LPFP Sbjct: 5 IIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKRVSKAMRGHFAASKVEPKRKLVEFRVPADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGFAGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVVKTDADRGLVFIKGAVPGPKSGWVTVKDAVKKKAPEG-LPFP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOP2 (50S ribosomal protein L3 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36 Identity = 82/206 (39.81%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KRK+ EF V+EDAL+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V ++D R L+ V G VPG+ G ++ ++DAV K Sbjct: 5 VIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVYMPKAERGQFAVAKVEPKRKVAEFRVSEDALIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQLDVERGLILVEGAVPGSKGGWISVRDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOCS (50S ribosomal protein L3 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36 Identity = 87/217 (40.09%), Postives = 123/217 (56.68%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVXLLPFP 650 LIA K G+T + G +PV+VL +D V +T +++G+ +LQ+G G+ K K++ K + F V K+KL EF VT DAL+ +G + HF+PGQ+VD+ RW F G+ A+HG S+SHRS GSTG R PGK F + TV+N+ V ++D R L+ V+G +PG G +V I+DAV KK PD PFP Sbjct: 5 LIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKNVAKAQREQFARAKVEPKKKLVEFRVTPDALIEVGAEITADHFVPGQFVDVTGTTIGRGFTGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVVQVDVERGLILVKGAIPGHEGGWVLIRDAVKKKLPDG--APFP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_PHEZH (50S ribosomal protein L3 OS=Phenylobacterium zucineum (strain HLK1) GN=rplC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36 Identity = 84/204 (41.18%), Postives = 115/204 (56.37%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+ +D+ G +PV+VL ++ V +T +K+G+ +LQ+G G KK K+ +K GHF V K KL EF V+ED L+ +G L HF+PGQ VDI RW F G+ A+HG S+SHRS GSTGQR PG+ F T N+ V+++D R L+ V+G VPG G FV I+DAV Sbjct: 5 VIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKNTSKGLRGHFAKGQVEPKAKLVEFKVSEDNLIDVGAELTADHFVPGQKVDITGTTVGKGFAGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVWRVDAERGLILVKGAVPGTEGTFVKIRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOP5 (50S ribosomal protein L3 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.343e-36 Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F A V KRK+ EF V+ED+++PIG + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V ++D R L+ V G VPG+ G ++ ++DAV K Sbjct: 5 VIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVYMPKAERGQFAAAKVEPKRKVAEFRVSEDSMIPIGAEIQADHFVVGQFVDVTGTSVGKGFAGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQLDVERGLILVEGAVPGSKGGWIAVRDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_CAUSK (50S ribosomal protein L3 OS=Caulobacter sp. (strain K31) GN=rplC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.343e-36 Identity = 82/206 (39.81%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T +D+ G +PV+VL +D V+ +T EK+G+ +LQ+G G KK K+ GHF V KR + EF V E AL+ +G H++ GQ VDI RW F G+ A+HG S+SHRS GSTGQR PG+ F T NV V+K+D R L+ V+G VPG+ G++V ++DA+ K Sbjct: 10 VIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNTPNAMRGHFAKNSVEPKRIVAEFRVDEAALIEVGAEFTADHYVAGQKVDIQGITVGKGFAGAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWKVDVERGLILVKGAVPGSEGSYVKVRDAIKK 215
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOPS (50S ribosomal protein L3 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.992e-36 Identity = 82/206 (39.81%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KRK+ EF V+EDAL+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V + D R L+ V G VPG+ G ++ ++DAV K Sbjct: 5 VIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVYMPKAERGQFAVAKVEPKRKVAEFRVSEDALIPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQTDVERGLILVEGAVPGSKGGWISVRDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOPB (50S ribosomal protein L3 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.992e-36 Identity = 81/206 (39.32%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T + + G IPV+VL + + V +T EK G+ ++Q+G G +K ++ K E G F V KRK+ EF V+EDAL+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V + D AR L+ V G VPG+ G ++ ++DAV K Sbjct: 5 VIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVYLPKAERGQFAVAKVEPKRKVAEFRVSEDALIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQTDVARGLILVEGAVPGSKGGWIAVRDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_NITWN (50S ribosomal protein L3 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.992e-36 Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KRK+ EF V+ED+L+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V + D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVYMPKAERGQFAVAKVAPKRKVAEFRVSEDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGYAGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQTDVERGLILVEGAVPGSKGGWIAVRDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRASO (50S ribosomal protein L3 OS=Bradyrhizobium sp. (strain ORS278) GN=rplC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.908e-36 Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KRKL EF V+ED+L+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK + + T N+ V + D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVYMPKAERGQFAVAKVEPKRKLAEFRVSEDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVVQTDVERGLILVEGAVPGSKGGWISVRDAV-KKP 211 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |