DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_XANP2 (50S ribosomal protein L3 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.104e-36 Identity = 81/207 (39.13%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK 623 +IA K G+T + G +PV+VL V+ V +T +K G+ ++Q+G G++K K++T+ E GHF V K KL EF V E+AL+P+G + HF+ GQYVD+ R F G+ A+HG S+SHRS+GSTG R PGK F T +N+ V D R L+ V G VPG +G ++ ++DAV KK Sbjct: 5 VIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKNVTRAERGHFAVAQVEPKHKLAEFRVPEEALIPVGAEITADHFVVGQYVDVTGTTIGKGFAGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVVMTDVERGLIAVEGAVPGHAGGWITVRDAVKKK 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_SPHAL (50S ribosomal protein L3 OS=Sphingopyxis alaskensis GN=rplC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.104e-36 Identity = 82/216 (37.96%), Postives = 120/216 (55.56%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVXLLPFP 650 +IA K G+T + G +PV+VL ++ V V+ E++G+ ++Q+G G K K++ KP+ G + V K KL EF V +DA L +G L HF+ GQ VDI RWGF GM A+HG S+SHR+ GSTG R PG+VF RT +N+ + + D R L++V+G VPG+ G ++ ++DAV K P P+P Sbjct: 5 VIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKNVAKPQRGAYGKAEVEPKAKLVEFRVADDATLDVGAELSADHFVAGQMVDIQGVTQGKGFAGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIVRTDAERGLLFVKGSVPGSKGGWLLVRDAV-KLPRHPEAPYP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_MARMM (50S ribosomal protein L3 OS=Maricaulis maris (strain MCS10) GN=rplC PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.706e-36 Identity = 80/204 (39.22%), Postives = 119/204 (58.33%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 ++A K G+T + + G+ +P +VL +D+ V KT +++G+ +LQ+G G+ K K K GHF V KRKL EF V EDAL+ +G+ L HF+PGQ VD+ R GF G+ A+HG S+SHRS GSTGQ PGKVF + T +N+ V ++D R ++ V+G VPG++G +V ++DA+ Sbjct: 10 VVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRTPKAMRGHFAKAKVAPKRKLVEFRVAEDALIEVGSELTADHFVPGQKVDVAGISIGKGFAGAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVRVDVERGIVLVKGAVPGSAGGWVELRDAI 213
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_NITHX (50S ribosomal protein L3 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.485e-35 Identity = 82/208 (39.42%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + G IPV+VL + + V +T EK G+ +LQ+G G +K ++ K E G F V KRK+ EF V+ED+L+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V + D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVYLPKAERGQFAVAKVEPKRKVAEFRVSEDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVVQTDVERGLILVEGAVPGSKGGWIAVRDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRASB (50S ribosomal protein L3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.485e-35 Identity = 82/208 (39.42%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KRK+ EF V+ED+L+P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK + + T N+ V + D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVYMPKAERGQFAVAKVEPKRKVAEFRVSEDSLIPVGAEILADHFVVGQFVDVTGTTVGKGFAGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVVQTDVERGLILVEGAVPGSKGGWISVRDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRAJA (50S ribosomal protein L3 OS=Bradyrhizobium japonicum GN=rplC PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.939e-35 Identity = 81/208 (38.94%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + + G IPV+VL + + V +T EK G+ +LQ+G G +K +M K E G F V KR++ EF VT DA++P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK + + T N+ V ++D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVYMPKAERGQFAVAKVEPKRRVEEFRVTADAMIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVVQLDVERGLILVEGAVPGSKGGWIRVRDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_PARDP (50S ribosomal protein L3 OS=Paracoccus denitrificans (strain Pd 1222) GN=rplC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.533e-35 Identity = 88/216 (40.74%), Postives = 119/216 (55.09%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVXLLPFP 650 +IA K G+T + + G ++PV+VL VD+ V +T E++G+ +LQ+G G+ K K T GHF V KRK+ EF V+ + L+ +G + H+ GQYVDI R F G+ ASHG S+SHRS GSTGQ PGKVF + T +N+ V K D R L+ V+G VPG+ G +V IKDAV KKP FP Sbjct: 6 VIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKRTTAALRGHFAKANVAPKRKIAEFRVSPENLVEVGEEIVADHYFEGQYVDIAGTSIGKGFAGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVVKTDAERGLIMVKGSVPGSKGGWVTIKDAV-KKPLAESTVFP 220
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_OLICO (50S ribosomal protein L3 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rplC PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.308e-35 Identity = 81/208 (38.94%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+ + + G IPV+VL + + V +T +K G+ +LQ+G G +K +M K E G F V KRK+ EF V+EDA++P+G + HF+ GQ+VD+ RW F G+ A+HG S+SHRS+GSTG R PGK F + T N+ V + D R L+ V G VPG+ G ++ ++DAV KKP Sbjct: 5 VIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVYMPKAERGQFAVAKVEPKRKVAEFRVSEDAIIPVGAEIQADHFVVGQFVDVTGTSIGKGYAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQTDVERGLLLVEGAVPGSKGGWITVRDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICAH (50S ribosomal protein L3 OS=Rickettsia akari (strain Hartford) GN=rplC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.643e-35 Identity = 81/206 (39.32%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RIP++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E + I +L V HF+ GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ +RG +PG +++ IKDAV K Sbjct: 5 IIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEGNFIDIAANLEVDHFMAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDRERKLIMIRGSIPGHKNSYLSIKDAVKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_AZOC5 (50S ribosomal protein L3 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplC PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 5.643e-35 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK 623 +IA K G+T + G +PV+VL V+ V +T +K G+ ++Q+G G++K K+ K E G F V KRKL EF V DAL+P+G + HF+ GQYVD+ R F G+ ASHG S+SHRS+GSTG R PGK F T +N+ V D R L+ V G VPG +G ++ ++DAV K+ Sbjct: 5 VIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKNTNKAERGQFARAEVEPKRKLAEFRVDADALIPVGAEITADHFVVGQYVDVTGTTIGKGFAGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVVMTDVERGLIAVEGAVPGHAGGWIMVRDAVKKR 211 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |