DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICBR (50S ribosomal protein L3 OS=Rickettsia bellii (strain RML369-C) GN=rplC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.370e-35 Identity = 79/206 (38.35%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G R+P++++ VDD V K EK G+ +L +G KK +TKP F V K KL+EF ++ED + I SL V HF GQ++D+ R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ ID + L+ ++G +PG G+++ IKDA+ K Sbjct: 5 IIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISRVTKPMKQVFANAKVSPKTKLKEFRISEDNFIDIAASLEVDHFTAGQFIDVTATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIFAIDKEQGLIMIQGSIPGHKGSYISIKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICB8 (50S ribosomal protein L3 OS=Rickettsia bellii (strain OSU 85-389) GN=rplC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.370e-35 Identity = 79/206 (38.35%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G R+P++++ VDD V K EK G+ +L +G KK +TKP F V K KL+EF ++ED + I SL V HF GQ++D+ R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ ID + L+ ++G +PG G+++ IKDA+ K Sbjct: 5 IIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISRVTKPMKQVFANAKVSPKTKLKEFRISEDNFIDIAASLEVDHFTAGQFIDVTATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIFAIDKEQGLIMIQGSIPGHKGSYISIKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHOS4 (50S ribosomal protein L3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rplC PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35 Identity = 84/208 (40.38%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T + + G ++PV+VL +D V +T EK+G+ ++Q+G G K K ++ + GHF V KRK+ EF VT D L+ +G + H+ GQ+VDI R F G+ ASHG S+SHRS GSTGQ PGKVF + T +N+ V + D R L+ V+G VPG+ G +V IKDAV KKP Sbjct: 5 VIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKRVSAAQRGHFAKANVEPKRKIAEFRVTPDCLIDVGAEITADHYFAGQFVDIAGTSIGKGFAGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVVRTDSDRGLIMVKGAVPGSKGGWVTIKDAV-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_DINSH (50S ribosomal protein L3 OS=Dinoroseobacter shibae (strain DFL 12) GN=rplC PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35 Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVXLLP 644 +IA K G+T + + G ++PV+VL +D V +T EK+G+ ++Q+G G K K TK GHF A V KRK+ EF V + L+ +G + H+ GQYVD+ R F G+ ASHG S+SHRS GSTGQ PGKVF + T +N+ V + D R L+ ++G VPG+ G +V IKDAV K P+ +LP Sbjct: 5 VIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKRTTKAMRGHFAAASVEPKRKVAEFRVAPENLINVGEEITADHYFEGQYVDVSGTSIGKGFAGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVVRTDADRGLIMIKGAVPGSKGGWVTIKDAVKKPVPENVILP 219
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICM5 (50S ribosomal protein L3 OS=Rickettsia massiliae (strain Mtu5) GN=rplC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.642e-34 Identity = 79/206 (38.35%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + I TSL V HF GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ +KDA+ K Sbjct: 5 IIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEEHFIDIATSLEVDHFTAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIFAVDKERKLIMIQGSIPGHKNSYLSVKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHIEC (50S ribosomal protein L3 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.642e-34 Identity = 82/204 (40.20%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +D V +T EK G+ ++Q+G GQ K K+ +K G+F V K KL EF V+ED LL IGT L HF GQ VD+ R GF G+ A+HG S+SHRS GSTG R PGKVF + T +N+ V D R L+ ++G VPG+ G ++ ++DAV Sbjct: 5 VIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAVANVEPKAKLAEFRVSEDNLLEIGTELKADHFAAGQLVDVTGTTIGKGFAGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGSKGAWIIVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHIE6 (50S ribosomal protein L3 OS=Rhizobium etli (strain CIAT 652) GN=rplC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.642e-34 Identity = 82/204 (40.20%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +D V +T EK G+ ++Q+G GQ K K+ +K G+F V K KL EF V+ED LL IGT L HF GQ VD+ R GF G+ A+HG S+SHRS GSTG R PGKVF + T +N+ V D R L+ ++G VPG+ G ++ ++DAV Sbjct: 5 VIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAVANVEPKAKLAEFRVSEDNLLEIGTELKAGHFAAGQLVDVTGTTIGKGFAGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGSKGAWIIVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_PROMH (50S ribosomal protein L3 OS=Proteus mirabilis (strain HI4320) GN=rplC PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.658e-34 Identity = 79/204 (38.73%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ +++N V+QVK EK+G+ ++QV G KK + KPE GHF GV R LREF + E +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PG+VF Q TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGEEYTVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RICCK (50S ribosomal protein L3 OS=Rickettsia canadensis (strain McKiel) GN=rplC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34 Identity = 78/206 (37.86%), Postives = 117/206 (56.80%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYK 620 +IA K G+T+ ++ G RI ++++ VDD V KT EK G+ +L +G KK +TKP F + K KL+EF ++E+ + + SL V HF+ GQ+VDI R F+G+ ASHG S+SHRS GSTGQR PGKVF Q T++N+ ++ +D R L+ ++G +PG +++ IKDA+ K Sbjct: 5 IIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEENFIDVAASLEVDHFMAGQFVDITAITIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDKDRKLIMIQGSIPGHKNSYLSIKDAIKK 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_RHILW (50S ribosomal protein L3 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rplC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34 Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +D V +T EK G+ ++Q+G GQ K K+ +K G+F V K K+ EF V+ED LL IGT + HF GQ VD+ R GF G+ A+HG S+SHRS GSTG R PGKVF + T +N+ V D R L+ ++G VPG+ G ++ ++DAV Sbjct: 5 VIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAVANVEPKAKVAEFRVSEDQLLEIGTEIKAGHFAAGQLVDVTGTTIGKGFAGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGSKGAWIIVRDAV 208 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |